RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 MTMR2Q13614 643 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 KSR1Q8IVT5 923 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 MICALL1Q8N3F8 863 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 IL31RAQ8NI17 732 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 ZKSCAN4Q969J2 545 aaPredicted RBP21.31■■□□□ 1
LAPTM4B-204ENST00000619747 SH2D3AQ9BRG2 576 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 NUP58Q9BVL2 599 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 WRAP73Q9P2S5 460 aaPredicted RBP21.31■■□□□ 1
LAPTM4B-204ENST00000619747 RCCD1A6NED2 376 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 HERVK_113P62684 666 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 ENOX2Q16206 610 aaKnown RBP21.31■■□□□ 1
LAPTM4B-204ENST00000619747 MAEAQ7L5Y9 396 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 FAM160B2Q86V87 743 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 KCTD10Q9H3F6 313 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 MED4Q9NPJ6 270 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 SYNPO2Q9UMS6 1093 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 ZNF536O15090 1300 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 SPP2Q13103 211 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 CCDC122Q5T0U0 273 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 KIAA1328Q86T90 577 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 CEP89Q96ST8 783 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 LACRTQ9GZZ8 138 aa21.31■■□□□ 1
LAPTM4B-204ENST00000619747 CLIC2O15247 247 aa21.3■■□□□ 1
LAPTM4B-204ENST00000619747 PSMD10O75832 226 aa21.3■■□□□ 1
LAPTM4B-204ENST00000619747 NR2F2P24468 414 aa21.3■■□□□ 1
LAPTM4B-204ENST00000619747 LONRF2Q1L5Z9 754 aa21.3■■□□□ 1
LAPTM4B-204ENST00000619747 HSD17B14Q9BPX1 270 aa21.3■■□□□ 1
LAPTM4B-204ENST00000619747 KIF1CO43896 1103 aaKnown RBP21.3■■□□□ 1
LAPTM4B-204ENST00000619747 N4BP1O75113 896 aaKnown RBP21.3■■□□□ 1
LAPTM4B-204ENST00000619747 GCNT3O95395 438 aa21.3■■□□□ 1
LAPTM4B-204ENST00000619747 PTGER2P43116 358 aa21.3■■□□□ 1
LAPTM4B-204ENST00000619747 PRKG1Q13976 671 aa21.3■■□□□ 1
LAPTM4B-204ENST00000619747 PRPF38AQ8NAV1 312 aaKnown RBP21.3■■□□□ 1
LAPTM4B-204ENST00000619747 WDR11Q9BZH6 1224 aa21.3■■□□□ 1
LAPTM4B-204ENST00000619747 VPS33BQ9H267 617 aa21.3■■□□□ 1
LAPTM4B-204ENST00000619747 LRRC53A6NM62 1247 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 ITGB5P18084 799 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 HOXD13P35453 343 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 KCNMA1Q12791 1236 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 CACNA2D4Q7Z3S7 1137 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 WNK4Q96J92 1243 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 UNC45AQ9H3U1 944 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 IPO5O00410 1097 aaKnown RBP21.29■■□□□ 1
LAPTM4B-204ENST00000619747 MNAT1P51948 309 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 ARID5AQ03989 594 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 RINT1Q6NUQ1 792 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 GPR161Q8N6U8 529 aaKnown RBP21.29■■□□□ 1
LAPTM4B-204ENST00000619747 RETREG2Q8NC44 543 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 CCDC42Q96M95 316 aa21.29■■□□□ 1
LAPTM4B-204ENST00000619747 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.29■■□□□ 1
LAPTM4B-204ENST00000619747 CTAGE9A4FU28 777 aa21.28■■□□□ 1
LAPTM4B-204ENST00000619747 TBCAO75347 108 aaKnown RBP21.28■■□□□ 1
LAPTM4B-204ENST00000619747 TRAF1Q13077 416 aa21.28■■□□□ 1
LAPTM4B-204ENST00000619747 MEA1Q16626 185 aa21.28■■□□□ 1
LAPTM4B-204ENST00000619747 ZC2HC1CQ53FD0 456 aaPredicted RBP21.28■■□□□ 1
LAPTM4B-204ENST00000619747 HDAC6Q9UBN7 1215 aa21.28■■□□□ 1
LAPTM4B-204ENST00000619747 CCDC189A1A4V9 331 aa21.28■■□□□ 1
LAPTM4B-204ENST00000619747 MACROD2A1Z1Q3 448 aa21.28■■□□□ 1
LAPTM4B-204ENST00000619747 TULP1O00294 542 aaPredicted RBP21.28■■□□□ 1
LAPTM4B-204ENST00000619747 NMT1P30419 496 aaKnown RBP21.28■■□□□ 1
LAPTM4B-204ENST00000619747 TNFAIP1Q13829 316 aa21.28■■□□□ 1
LAPTM4B-204ENST00000619747 LRRC31Q6UY01 552 aa21.28■■□□□ 1
LAPTM4B-204ENST00000619747 MYCT1Q8N699 235 aa21.28■■□□□ 1
LAPTM4B-204ENST00000619747 ARHGAP20Q9P2F6 1191 aa21.28■■□□□ 1
LAPTM4B-204ENST00000619747 FAN1Q9Y2M0 1017 aa21.28■■□□□ 1
LAPTM4B-204ENST00000619747 PITPNM2Q9BZ72 1349 aa21.27■■□□□ 1
LAPTM4B-204ENST00000619747 ICAM1P05362 532 aa21.27■■□□□ 1
LAPTM4B-204ENST00000619747 EIF2AK2P19525 551 aaKnown RBP21.27■■□□□ 1
LAPTM4B-204ENST00000619747 PLS1Q14651 629 aa21.27■■□□□ 1
LAPTM4B-204ENST00000619747 TADA2BQ86TJ2 420 aa21.27■■□□□ 1
LAPTM4B-204ENST00000619747 MTFR1LQ9H019 292 aa21.27■■□□□ 1
LAPTM4B-204ENST00000619747 FRMD3A2A2Y4 597 aa21.27■■□□□ 1
LAPTM4B-204ENST00000619747 ZNF263O14978 683 aa21.27■■□□□ 1
LAPTM4B-204ENST00000619747 IPO7O95373 1038 aaKnown RBP21.27■■□□□ 1
LAPTM4B-204ENST00000619747 EYA4O95677 639 aa21.27■■□□□ 1
LAPTM4B-204ENST00000619747 MAP3K10Q02779 954 aa21.27■■□□□ 1
LAPTM4B-204ENST00000619747 POLR3CQ9BUI4 534 aaPredicted RBP21.27■■□□□ 1
LAPTM4B-204ENST00000619747 SAMM50Q9Y512 469 aa21.27■■□□□ 1
LAPTM4B-204ENST00000619747 RPS6KA5O75582 802 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 VCAM1P19320 739 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 CYLC1P35663 651 aaPredicted RBP21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 DLK2Q6UY11 383 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 NSMFQ6X4W1 530 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 SLC5A5Q92911 643 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 KCNH7Q9NS40 1196 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 CETN3O15182 167 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 CPP00450 1065 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 MYCLP12524 364 aaPredicted RBP21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 EIF4A3P38919 411 aaKnown RBP21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 EPS15P42566 896 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 CASP4P49662 377 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 KNOP1Q1ED39 458 aaKnown RBP21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 TCERG1LQ5VWI1 586 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 EFCAB13Q8IY85 973 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 PLAGL2Q9UPG8 496 aa21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 CTDP1Q9Y5B0 961 aaPredicted RBP21.26■□□□□ 0.99
LAPTM4B-204ENST00000619747 POLR2FP61218 127 aaKnown RBP21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 DCAF17Q5H9S7 520 aaPredicted RBP21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 ANKRD13CQ8N6S4 541 aa21.25■□□□□ 0.99
LAPTM4B-204ENST00000619747 FBXO41Q8TF61 875 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms