RNA–Protein interactions for RNA: ENST00000619186.4

TP53-224, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-224	ENST00000619186	RAPGEF1	Q13905	1077 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	ABCB5	Q2M3G0	1257 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	CCDC65	Q8IXS2	484 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	ACER1	Q8TDN7	264 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	PIGO	Q8TEQ8	1089 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	SLC16A10	Q8TF71	515 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	DCAF4	Q8WV16	495 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	SELENOO	Q9BVL4	669 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	GAN	Q9H2C0	597 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	BHMT2	Q9H2M3	363 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	RBM12	Q9NTZ6	932 aa	Known RBP	11.95	□□□□□ -0.5
TP53-224	ENST00000619186	CEP72	Q9P209	647 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	VAV3	Q9UKW4	847 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	PJA2	O43164	708 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	USO1	O60763	962 aa	Known RBP	11.95	□□□□□ -0.5
TP53-224	ENST00000619186	TACC1	O75410	805 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	AKAP3	O75969	853 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	RNASE9	P60153	205 aa	Known RBP	11.95	□□□□□ -0.5
TP53-224	ENST00000619186	GJB7	Q6PEY0	223 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.95	□□□□□ -0.5
TP53-224	ENST00000619186	RBM46	Q8TBY0	533 aa	Known RBP	11.95	□□□□□ -0.5
TP53-224	ENST00000619186	WDR18	Q9BV38	432 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	AMN	Q9BXJ7	453 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	TSGA10	Q9BZW7	698 aa		11.95	□□□□□ -0.5
TP53-224	ENST00000619186	TESPA1	A2RU30	521 aa	Predicted RBP	11.94	□□□□□ -0.5
TP53-224	ENST00000619186	RBAK-RBAKDN	I3L0D1	243 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	CLIC2	O15247	247 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	PALM	O75781	387 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	FGFR1OP	O95684	399 aa	Known RBP	11.94	□□□□□ -0.5
TP53-224	ENST00000619186	EGFR	P00533	1210 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	CTTN	Q14247	550 aa	Known RBP	11.94	□□□□□ -0.5
TP53-224	ENST00000619186	TRADD	Q15628	312 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	SYDE2	Q5VT97	1194 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	SFMBT2	Q5VUG0	894 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	FBXO11	Q86XK2	927 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.94	□□□□□ -0.5
TP53-224	ENST00000619186	RTKN2	Q8IZC4	609 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.94	□□□□□ -0.5
TP53-224	ENST00000619186	PIM2	Q9P1W9	311 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.94	□□□□□ -0.5
TP53-224	ENST00000619186	CHMP2A	O43633	222 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	RPA1	P27694	616 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	SREBF1	P36956	1147 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	GGCX	P38435	758 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	PRELP	P51888	382 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	MARS	P56192	900 aa	Known RBP	11.94	□□□□□ -0.5
TP53-224	ENST00000619186	CKAP4	Q07065	602 aa	Known RBP	11.94	□□□□□ -0.5
TP53-224	ENST00000619186	HAUS3	Q68CZ6	603 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.94	□□□□□ -0.5
TP53-224	ENST00000619186	TMEM179	Q6ZVK1	233 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.94	□□□□□ -0.5
TP53-224	ENST00000619186	GML	Q99445	158 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
TP53-224	ENST00000619186	LRRC27	Q9C0I9	530 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	PRR12	Q9ULL5	1215 aa		11.94	□□□□□ -0.5
TP53-224	ENST00000619186	ASTN1	O14525	1302 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	IGLV3-22	A0A075B6J6	115 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	SSU72P8	A0A1W2PR75	194 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	ESYT3	A0FGR9	886 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	TARSL2	A2RTX5	802 aa	Known RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	RNF40	O75150	1001 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	NAP1L1	P55209	391 aa	Known RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	FKBP1A	P62942	108 aa	Known RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	TUBB4B	P68371	445 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	PTK2	Q05397	1052 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	CXCL9	Q07325	125 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	COG2	Q14746	738 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186		Q4G0T1	1027 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	SYT2	Q8N9I0	419 aa	Predicted RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	SUPT20H	Q8NEM7	779 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	AEN	Q8WTP8	325 aa	Known RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	EXOC4	Q96A65	974 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	CEP63	Q96MT8	703 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	CSRNP1	Q96S65	589 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	FAM204A	Q9H8W3	233 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	HDAC9	Q9UKV0	1011 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	KIF13B	Q9NQT8	1826 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	ATAD5	Q96QE3	1844 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	SPDYE3	A6NKU9	549 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	SERPING1	P05155	500 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	VIL1	P09327	827 aa	Known RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	BMP3	P12645	472 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	AP3B2	Q13367	1082 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	SLC9C1	Q4G0N8	1177 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	RBM26	Q5T8P6	1007 aa	Known RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	FOXR2	Q6PJQ5	311 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	SLFN12	Q8IYM2	578 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	GMCL1P1	Q8NEA9	526 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	SREK1	Q8WXA9	508 aa	Known RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	MRI	Q9BWK5	157 aa		11.93	□□□□□ -0.5
TP53-224	ENST00000619186	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.93	□□□□□ -0.5
TP53-224	ENST00000619186	NFKBIE	O00221	500 aa		11.92	□□□□□ -0.5
TP53-224	ENST00000619186	PON1	P27169	355 aa		11.92	□□□□□ -0.5
TP53-224	ENST00000619186	NMT1	P30419	496 aa	Known RBP	11.92	□□□□□ -0.5
TP53-224	ENST00000619186	HDLBP	Q00341	1268 aa	Known RBP	11.92	□□□□□ -0.5
TP53-224	ENST00000619186	ZYX	Q15942	572 aa	Known RBP	11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms