RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 BPIFB4P59827 614 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 MXRA7P84157 204 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 DCAF15Q66K64 600 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.07■□□□□ 0
CNOT3-210ENST00000618939 GLG1Q92896 1179 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 FMO2Q99518 471 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.07■□□□□ 01e-7■■□□□ 11.9
CNOT3-210ENST00000618939 SSU72P8A0A1W2PR75 194 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 THAP12O43422 761 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 KLK7P49862 253 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 POLGP54098 1239 aaPredicted RBP15.07■□□□□ 0
CNOT3-210ENST00000618939 VPS37BQ9H9H4 285 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 RIC1Q4ADV7 1423 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 JCADQ9P266 1359 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 FAM237AA0A1B0GTK4 181 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 PRELPP51888 382 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 ALCAMQ13740 583 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 TXNRD3Q86VQ6 643 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 VSIG1Q86XK7 387 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 DYDC2Q96IM9 177 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 CEP170P1Q96L14 293 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 RAB20Q9NX57 234 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 PACSIN2Q9UNF0 486 aaPredicted RBP15.07■□□□□ 0
CNOT3-210ENST00000618939 NFAT5O94916 1531 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 FAM205AQ6ZU69 1335 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 ATF2P15336 505 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 HHATQ5VTY9 493 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 EFCAB13Q8IY85 973 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 ERGIC2Q96RQ1 377 aa15.07■□□□□ 0
CNOT3-210ENST00000618939 ATF7P17544 494 aaPredicted RBP15.06■□□□□ 0
CNOT3-210ENST00000618939 IFT88Q13099 833 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 RHOT2Q8IXI1 618 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 CRAMP1Q96RY5 1269 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 HMGB1P1B2RPK0 211 aaPredicted RBP15.06■□□□□ 0
CNOT3-210ENST00000618939 EIF2AK2P19525 551 aaKnown RBP15.06■□□□□ 0
CNOT3-210ENST00000618939 MAPK4P31152 587 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 CYP2C19P33261 490 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 DR1Q01658 176 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 PDCLQ13371 301 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 SLC4A9Q96Q91 983 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 LRRC1Q9BTT6 524 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 KBTBD4Q9NVX7 518 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 SEPT9Q9UHD8 586 aaPredicted RBP15.06■□□□□ 0
CNOT3-210ENST00000618939 TNS2Q63HR2 1409 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 FXR2P51116 673 aaKnown RBP eCLIP15.06■□□□□ 0
CNOT3-210ENST00000618939 TSNARE1Q96NA8 513 aa15.06■□□□□ 0
CNOT3-210ENST00000618939 INTS9Q9NV88 658 aaKnown RBP15.06■□□□□ 0
CNOT3-210ENST00000618939 NPHP3-ACAD11A0A0J9YXS1 232 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 ECE2O60344 883 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 PIK3CAP42336 1068 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 VPS72Q15906 364 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 ANKFY1Q9P2R3 1169 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 NOVA2Q9UNW9 492 aaKnown RBP15.05■□□□□ 0
CNOT3-210ENST00000618939 TFR2Q9UP52 801 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 PLAAQ9Y263 795 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 A0A087WUV0 522 aaPredicted RBP15.05■□□□□ 0
CNOT3-210ENST00000618939 A0A1W2PQJ5 194 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 GOLGA8IPA6NC78 632 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 GOLGA8JA6NMD2 632 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 MYO1CO00159 1063 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 FYB2Q5VWT5 728 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 TRIM65Q6PJ69 517 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 C3orf67Q6ZVT6 689 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 FRMD5Q7Z6J6 570 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 CCDC89Q8N998 374 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 NEK9Q8TD19 979 aa15.05■□□□□ 0
CNOT3-210ENST00000618939 NRXN3Q9Y4C0 1643 aa15.05■□□□□ -0
CNOT3-210ENST00000618939 GRID2IPA4D2P6 1211 aa15.05■□□□□ -0
CNOT3-210ENST00000618939 SGO2Q562F6 1265 aa15.05■□□□□ -0
CNOT3-210ENST00000618939 TTI2Q6NXR4 508 aa15.05■□□□□ -0
CNOT3-210ENST00000618939 EIF2AK1Q9BQI3 630 aaKnown RBP15.05■□□□□ -0
CNOT3-210ENST00000618939 JMJD4Q9H9V9 463 aa15.05■□□□□ -0
CNOT3-210ENST00000618939 TXNDC16Q9P2K2 825 aa15.05■□□□□ -0
CNOT3-210ENST00000618939 A0A087X0B3 334 aa15.05■□□□□ -0
CNOT3-210ENST00000618939 IFNAR2P48551 515 aa15.05■□□□□ -0
CNOT3-210ENST00000618939 PEX3P56589 373 aa15.05■□□□□ -0
CNOT3-210ENST00000618939 SLC18A3Q16572 532 aa15.05■□□□□ -0
CNOT3-210ENST00000618939 SEL1LQ9UBV2 794 aa15.05■□□□□ -0
CNOT3-210ENST00000618939 PDXKO00764 312 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 ECEL1O95672 775 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 ASNSP08243 561 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 PADI6Q6TGC4 694 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 ANKRD35Q8N283 1001 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 ANKRD65E5RJM6 399 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 NDC80O14777 642 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 YWHAEP62258 255 aaKnown RBP15.04■□□□□ -0
CNOT3-210ENST00000618939 TBX2Q13207 712 aaPredicted RBP15.04■□□□□ -0
CNOT3-210ENST00000618939 DRAP1Q14919 205 aaPredicted RBP15.04■□□□□ -0
CNOT3-210ENST00000618939 BANK1Q8NDB2 785 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 SMC6Q96SB8 1091 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 DNAJC7Q99615 494 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 DDX47Q9H0S4 455 aaKnown RBP15.04■□□□□ -0
CNOT3-210ENST00000618939 VIPAS39Q9H9C1 493 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 ZNF148Q9UQR1 794 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 MAN1A1P33908 653 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 PLA2G4AP47712 749 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 ZBTB8OSQ8IWT0 167 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 BBOF1Q8ND07 529 aa15.04■□□□□ -0
CNOT3-210ENST00000618939 SREK1Q8WXA9 508 aaKnown RBP15.04■□□□□ -0
CNOT3-210ENST00000618939 TRIM11Q96F44 468 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms