RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 CENPKQ9BS16 269 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 EPN3Q9H201 632 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TLK1Q9UKI8 766 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PPP1R9AQ9ULJ8 1098 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 BCORL1Q5H9F3 1711 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 MAST3O60307 1309 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 SCP2P22307 547 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 EN1Q05925 392 aaPredicted RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 ARHGAP44Q17R89 818 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CHMP6Q96FZ7 201 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ZNF512BQ96KM6 892 aaPredicted RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 NT5C1BQ96P26 610 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 OSBPL9Q96SU4 736 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 DISC1Q9NRI5 854 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TPX2Q9ULW0 747 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 PTPN22Q9Y2R2 807 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 SDK1Q7Z5N4 2213 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 H7C0C1 242 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 SGK1O00141 431 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 GYG2O15488 501 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ZSCAN9O15535 394 aaPredicted RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 INHBAP08476 426 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ATP5OP48047 213 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 DR1Q01658 176 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PPP2R5AQ15172 486 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 SKIV2LQ15477 1246 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 CLEC4GQ6UXB4 293 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TRIM15Q9C019 465 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 A0A1W2PQC6 194 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ZNF189O75820 626 aaPredicted RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 FGGP02679 453 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CD19P15391 556 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ABCB4P21439 1286 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 BTDP43251 543 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 SNRPFP62306 86 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 MFSD14BQ5SR56 506 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TRMT10CQ7L0Y3 403 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 SPOCK3Q9BQ16 436 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 BRIP1Q9BX63 1249 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 AMNQ9BXJ7 453 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 AP1M1Q9BXS5 423 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CCSER1Q9C0I3 900 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TTC26A0AVF1 554 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 hCG_1984214I3L0E3 225 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 MAP2K7O14733 419 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 GUCY1A3Q02108 690 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ANKRD20A4Q4UJ75 823 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ANKRD20A8PQ5CZ79 823 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ANKRD20A2Q5SQ80 823 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ANKRD20A1Q5TYW2 823 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ALKBH5Q6P6C2 394 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 RAB44Q7Z6P3 723 aaPredicted RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 PYROXD1Q8WU10 500 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TCP11Q8WWU5 503 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 FAM20AQ96MK3 541 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PPCSQ9HAB8 311 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CD2APQ9Y5K6 639 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 TNNC2P02585 160 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 GARSP41250 739 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 PTPAQ15257 358 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 E2F5Q15329 346 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 RDH13Q8NBN7 331 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 GLG1Q92896 1179 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 PLA2G12BQ9BX93 195 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 GIMAP4Q9NUV9 329 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 UGGT1Q9NYU2 1555 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 ASCC3Q8N3C0 2202 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 ANO9A1A5B4 782 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 DNAJC8O75937 253 aaPredicted RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 PLS3P13797 630 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 HOXC8P31273 242 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 AARSP49588 968 aaKnown RBP eCLIP3.29□□□□□ -1.88
LPP-221ENST00000618621 YWHAGP61981 247 aaKnown RBP eCLIP3.29□□□□□ -1.88
LPP-221ENST00000618621 MYL7Q01449 175 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 NXNQ6DKJ4 435 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 CCDC127Q96BQ5 260 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 NOP53Q9NZM5 478 aaKnown RBP3.29□□□□□ -1.88
LPP-221ENST00000618621 SNX24Q9Y343 169 aa3.29□□□□□ -1.88
LPP-221ENST00000618621 MED14O60244 1454 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 IGSF1Q8N6C5 1336 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 GOLGA8HP0CJ92 632 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 MYBL1P10243 752 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 FDPSP14324 419 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 BAG6P46379 1132 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 GPR162Q16538 588 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 USP17L2Q6R6M4 530 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 REXO1L1PQ8IX06 675 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 FBXL16Q8N461 479 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 MSL3Q8N5Y2 521 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 JDP2Q8WYK2 163 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 GPKOWQ92917 476 aaPredicted RBP eCLIP3.28□□□□□ -1.88
LPP-221ENST00000618621 NRBF2Q96F24 287 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 FAM129AQ9BZQ8 928 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 NDST4Q9H3R1 872 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 AFF2P51816 1311 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 SMARCA1P28370 1054 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 CASP1P29466 404 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 MAGOHP61326 146 aaKnown RBP3.28□□□□□ -1.88
LPP-221ENST00000618621 FAM186BQ8IYM0 893 aa3.28□□□□□ -1.88
LPP-221ENST00000618621 RCOR2Q8IZ40 523 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms