RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 CDK5RAP3Q96JB5 506 aa22.81■■□□□ 1.24
SDHA-220ENST00000617470 IMPACTQ9P2X3 320 aa22.81■■□□□ 1.24
SDHA-220ENST00000617470 ZNF865P0CJ78 1059 aaPredicted RBP22.81■■□□□ 1.24
SDHA-220ENST00000617470 SP2Q02086 613 aa22.81■■□□□ 1.24
SDHA-220ENST00000617470 LRCH2Q5VUJ6 765 aa22.81■■□□□ 1.24
SDHA-220ENST00000617470 SH3TC2Q8TF17 1288 aa22.81■■□□□ 1.24
SDHA-220ENST00000617470 NELFBQ8WX92 580 aa22.81■■□□□ 1.24
SDHA-220ENST00000617470 FAM20AQ96MK3 541 aa22.81■■□□□ 1.24
SDHA-220ENST00000617470 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.8■■□□□ 1.24
SDHA-220ENST00000617470 CBFA2T2O43439 604 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 GAS7O60861 476 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 TGFB3P10600 412 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 ASIC1P78348 528 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 AMPD3Q01432 767 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 PAK1Q13153 545 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 ITGB3BPQ13352 177 aaPredicted RBP22.8■■□□□ 1.24
SDHA-220ENST00000617470 TMEM63BQ5T3F8 832 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 SLC5A5Q92911 643 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 DDX41Q9UJV9 622 aaKnown RBP22.8■■□□□ 1.24
SDHA-220ENST00000617470 KIAA1217Q5T5P2 1943 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 INHAP05111 366 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 UBA1P22314 1058 aaKnown RBP22.8■■□□□ 1.24
SDHA-220ENST00000617470 CCT6AP40227 531 aaKnown RBP22.8■■□□□ 1.24
SDHA-220ENST00000617470 SP4Q02446 784 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 PTPN21Q16825 1174 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 SLC9C1Q4G0N8 1177 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 TRPV1Q8NER1 839 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 VAV3Q9UKW4 847 aa22.8■■□□□ 1.24
SDHA-220ENST00000617470 MED24O75448 989 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 CYBAP13498 195 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 KCNA2P16389 499 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 CDK11BP21127 795 aaKnown RBP22.79■■□□□ 1.24
SDHA-220ENST00000617470 TNFAIP2Q03169 654 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 GJC2Q5T442 439 aaPredicted RBP22.79■■□□□ 1.24
SDHA-220ENST00000617470 IQSEC1Q6DN90 963 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 CNNM4Q6P4Q7 775 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 CYFIP1Q7L576 1253 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 VSTM4Q8IW00 320 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 COPS5Q92905 334 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 TEKT3Q9BXF9 490 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 BCAS3Q9H6U6 928 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 TBC1D22BQ9NU19 505 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 FAM184BQ9ULE4 1060 aa22.79■■□□□ 1.24
SDHA-220ENST00000617470 RBM47A0AV96 593 aaKnown RBP22.78■■□□□ 1.24
SDHA-220ENST00000617470 CHMP2AO43633 222 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 GGPS1O95749 300 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 PMS1P54277 932 aaKnown RBP22.78■■□□□ 1.24
SDHA-220ENST00000617470 STK4Q13043 487 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 ARMCX5Q6P1M9 558 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 CCDC62Q6P9F0 684 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 TCEAL9Q9UHQ7 104 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 HTTP42858 3142 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 POTEB3A0JP26 581 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 SMPD1P17405 629 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 CCND3P30281 292 aaPredicted RBP22.78■■□□□ 1.24
SDHA-220ENST00000617470 NEDD9Q14511 834 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 POTEBQ6S5H4 581 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 HPS3Q969F9 1004 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 RIT2Q99578 217 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 SENP7Q9BQF6 1050 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 MLXIPQ9HAP2 919 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 SPTLC3Q9NUV7 552 aa22.78■■□□□ 1.24
SDHA-220ENST00000617470 CENPFP49454 3210 aa22.77■■□□□ 1.24
SDHA-220ENST00000617470 KDM3AQ9Y4C1 1321 aa22.77■■□□□ 1.24
SDHA-220ENST00000617470 SLC26A4O43511 780 aa22.77■■□□□ 1.24
SDHA-220ENST00000617470 PSMD10O75832 226 aa22.77■■□□□ 1.24
SDHA-220ENST00000617470 MYCP01106 439 aaPredicted RBP22.77■■□□□ 1.24
SDHA-220ENST00000617470 CCZ1BP86790 482 aa22.77■■□□□ 1.24
SDHA-220ENST00000617470 CCZ1P86791 482 aaPredicted RBP22.77■■□□□ 1.24
SDHA-220ENST00000617470 NOLC1Q14978 699 aaKnown RBP eCLIP22.77■■□□□ 1.242e-8■■■■■ 26.9
SDHA-220ENST00000617470 NR1I3Q14994 352 aa22.77■■□□□ 1.24
SDHA-220ENST00000617470 DHX37Q8IY37 1157 aaKnown RBP22.77■■□□□ 1.24
SDHA-220ENST00000617470 LENG1Q96BZ8 264 aaPredicted RBP22.77■■□□□ 1.24
SDHA-220ENST00000617470 EXOC1Q9NV70 894 aa22.77■■□□□ 1.24
SDHA-220ENST00000617470 KIAA1024Q9UPX6 916 aa22.77■■□□□ 1.24
SDHA-220ENST00000617470 A0A1B0GTH6 734 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 TRIM49BA6NDI0 452 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 E9PMD0 336 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 DHX15O43143 795 aaKnown RBP22.76■■□□□ 1.23
SDHA-220ENST00000617470 SPATA31C1P0DKV0 1188 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 AKR1A1P14550 325 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 GSDMDP57764 484 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 KIAA0895Q8NCT3 520 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 NT5C3AQ9H0P0 336 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 JPH1Q9HDC5 661 aaPredicted RBP22.76■■□□□ 1.23
SDHA-220ENST00000617470 PVALEFA0A1B0GWK0 134 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 ADCY6O43306 1168 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 EHHADHQ08426 723 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 DUSP28Q4G0W2 176 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 NCAPH2Q6IBW4 605 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 FBXO46Q6PJ61 603 aaPredicted RBP22.76■■□□□ 1.23
SDHA-220ENST00000617470 UNC13DQ70J99 1090 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 DYMQ7RTS9 669 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 CATSPER3Q86XQ3 398 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 DDX12PQ92771 950 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 DNAJC19Q96DA6 116 aa22.76■■□□□ 1.23
SDHA-220ENST00000617470 CELF3Q5SZQ8 465 aaKnown RBP22.75■■□□□ 1.23
SDHA-220ENST00000617470 MAP3K21Q5TCX8 1036 aa22.75■■□□□ 1.23
SDHA-220ENST00000617470 IRF2BP1Q8IU81 584 aa22.75■■□□□ 1.23
SDHA-220ENST00000617470 UNC45AQ9H3U1 944 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms