RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 IKQ13123 557 aaPredicted RBP14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 NFIXQ14938 502 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 MAN2A1Q16706 1144 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 C12orf60Q5U649 245 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 ERICH1Q86X53 443 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 A0A087X0T9 212 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 IGF2BP3O00425 579 aaKnown RBP eCLIP14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 UBOX5O94941 541 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 FAM228BP0C875 321 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 BIRC3Q13489 604 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 CD302Q8IX05 232 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 GNPATO15228 680 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 BAG3O95817 575 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 BTDP43251 543 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 PLTPP55058 493 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 ZNF662Q6ZS27 426 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 KRT25Q7Z3Z0 450 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 CCDC84Q86UT8 332 aaPredicted RBP14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 ANKRD42Q8N9B4 389 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 MMTAG2Q9BU76 263 aaKnown RBP14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 MTFR1LQ9H019 292 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 ISCUQ9H1K1 167 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 ECT2Q9H8V3 914 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 TSKSQ9UJT2 592 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 KIAA1024Q9UPX6 916 aa14.59□□□□□ -0.07
PCDHA11-202ENST00000616325 PPIP5K2O43314 1243 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 STAT3P40763 770 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 ALDH5A1P51649 535 aaPredicted RBP14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 SLC8A3P57103 927 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 PSMD2Q13200 908 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 GRM4Q14833 912 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 FAM83BQ5T0W9 1011 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 TRPM8Q7Z2W7 1104 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 ZNF570Q96NI8 536 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 PAGR1Q9BTK6 254 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 AGAP1Q9UPQ3 857 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 CHD4Q14839 1912 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 H0Y3Z8 333 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 RGS16O15492 202 aaPredicted RBP14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 GRB10Q13322 594 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 SLC30A10Q6XR72 485 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 KCTD1Q719H9 257 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 ERGIC2Q96RQ1 377 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 KDM4CQ9H3R0 1056 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 KCNK9Q9NPC2 374 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 NID2Q14112 1375 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 FLT1P17948 1338 aa14.58□□□□□ -0.08
PCDHA11-202ENST00000616325 TAL1P17542 331 aaPredicted RBP14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 ABCB4P21439 1286 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 IFI35P80217 286 aaPredicted RBP14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 CYP4A11Q02928 519 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 GRIK3Q13003 919 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 DGKHQ86XP1 1220 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 MYOCDQ8IZQ8 938 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 AZI2Q9H6S1 392 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 UTP11Q9Y3A2 253 aaKnown RBP14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 ALS2Q96Q42 1657 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 RIMBP2O15034 1052 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 CDK8P49336 464 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 RUBCNQ92622 972 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 PPP1R12CQ9BZL4 782 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 BMP2KQ9NSY1 1161 aaPredicted RBP14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 G3BP2Q9UN86 482 aaKnown RBP14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 SPDYE3A6NKU9 549 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 FAM196BA6NMK8 535 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 MXRA7P84157 204 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 TTBK2Q6IQ55 1244 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 PEX26Q7Z412 305 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 OSBPL1AQ9BXW6 950 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 GGA2Q9UJY4 613 aa14.57□□□□□ -0.08
PCDHA11-202ENST00000616325 SFI1A8K8P3 1242 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 USP17L15C9J2P7 530 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 USP17L13C9JLJ4 530 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 USP17L11C9JVI0 530 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 USP17L18D6R9N7 530 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 USP17L22D6RA61 530 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 USP17L17D6RBQ6 530 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 USP17L19D6RCP7 530 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 USP17L20D6RJB6 530 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 DNAJC8O75937 253 aaPredicted RBP14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 KRT13P13646 458 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 RASA1P20936 1047 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 USP17L24Q0WX57 530 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 FAM26FQ5R3K3 315 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 USP17L6PQ6QN14 398 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 MREGQ8N565 214 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 CEP120Q8N960 986 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 ARHGEF10LQ9HCE6 1279 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 BLOC1S4Q9NUP1 217 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 RNF14Q9UBS8 474 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 DBR1Q9UK59 544 aaKnown RBP14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 COL18A1P39060 1754 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 SLIT2O94813 1529 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 POTEB3A0JP26 581 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 POTECB2RU33 542 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 TNFRSF8P28908 595 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 PLS1Q14651 629 aa14.56□□□□□ -0.08
PCDHA11-202ENST00000616325 ECM1Q16610 540 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms