RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 COA7Q96BR5 231 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 WDR19Q8NEZ3 1342 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 ZNF185O15231 689 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 CAV1Q03135 178 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 TBC1D10CQ8IV04 446 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 JDP2Q8WYK2 163 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 A0A1B0GTH6 734 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 IRAK1P51617 712 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 MCUQ8NE86 351 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 NOC2LQ9Y3T9 749 aaKnown RBP20.26■□□□□ 0.83
SPAST-203ENST00000615843 KIF28PB7ZC32 967 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 COPEO14579 308 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 GLG1Q92896 1179 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 PARVGQ9HBI0 331 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 DCTN4Q9UJW0 460 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 DNAJC12Q9UKB3 198 aa20.26■□□□□ 0.83
SPAST-203ENST00000615843 ARHGEF5Q12774 1597 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 CDK12Q9NYV4 1490 aaPredicted RBP20.25■□□□□ 0.83
SPAST-203ENST00000615843 FAM187AA6NFU0 413 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 LRRIQ4A6NIV6 560 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 CERKLQ49MI3 558 aaPredicted RBP20.25■□□□□ 0.83
SPAST-203ENST00000615843 ARHGEF16Q5VV41 709 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 GRAMD4Q6IC98 578 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 CALN1Q9BXU9 219 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 DIAPH2O60879 1101 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 KRT37O76014 449 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 AP2B1P63010 937 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 MB21D2Q8IYB1 491 aaPredicted RBP20.25■□□□□ 0.83
SPAST-203ENST00000615843 NACC1Q96RE7 527 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 NDE1Q9NXR1 346 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 GNGT2O14610 69 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 GRAMD1AQ96CP6 724 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 ALAS1P13196 640 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 CYB5R4Q7L1T6 521 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 STRBPQ96SI9 672 aaKnown RBP20.25■□□□□ 0.83
SPAST-203ENST00000615843 TLK1Q9UKI8 766 aa20.25■□□□□ 0.83
SPAST-203ENST00000615843 CYP2D7A0A087X1C5 515 aa20.24■□□□□ 0.83
SPAST-203ENST00000615843 CHRNA3P32297 505 aa20.24■□□□□ 0.83
SPAST-203ENST00000615843 PLA2G4AP47712 749 aa20.24■□□□□ 0.83
SPAST-203ENST00000615843 ZNF211Q13398 564 aaPredicted RBP20.24■□□□□ 0.83
SPAST-203ENST00000615843 FAM161BQ96MY7 647 aa20.24■□□□□ 0.83
SPAST-203ENST00000615843 SMYD3Q9H7B4 428 aa20.24■□□□□ 0.83
SPAST-203ENST00000615843 CCNL1Q9UK58 526 aaPredicted RBP20.24■□□□□ 0.83
SPAST-203ENST00000615843 CDC37Q16543 378 aaPredicted RBP20.24■□□□□ 0.83
SPAST-203ENST00000615843 SH3GLB2Q9NR46 395 aa20.24■□□□□ 0.83
SPAST-203ENST00000615843 ENO4A6NNW6 628 aa20.24■□□□□ 0.83
SPAST-203ENST00000615843 TTI1O43156 1089 aa20.24■□□□□ 0.83
SPAST-203ENST00000615843 HNRNPH1P31943 449 aaKnown RBP20.24■□□□□ 0.83
SPAST-203ENST00000615843 CASP2P42575 452 aa20.24■□□□□ 0.83
SPAST-203ENST00000615843 MKRN3Q13064 507 aaKnown RBP20.24■□□□□ 0.83
SPAST-203ENST00000615843 RGS9BPQ6ZS82 235 aa20.24■□□□□ 0.83
SPAST-203ENST00000615843 UPF3AQ9H1J1 476 aaKnown RBP20.24■□□□□ 0.83
SPAST-203ENST00000615843 ZNF277Q9NRM2 450 aaPredicted RBP20.24■□□□□ 0.83
SPAST-203ENST00000615843 TTC1Q99614 292 aa20.24■□□□□ 0.83
SPAST-203ENST00000615843 LSP1P33241 339 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 DDIT3P35638 169 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 BRDTQ58F21 947 aaPredicted RBP20.23■□□□□ 0.83
SPAST-203ENST00000615843 CDCA7Q9BWT1 371 aaPredicted RBP20.23■□□□□ 0.83
SPAST-203ENST00000615843 IRAK4Q9NWZ3 460 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 ORC6Q9Y5N6 252 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 ECM2O94769 699 aaPredicted RBP20.23■□□□□ 0.83
SPAST-203ENST00000615843 ARFIP2P53365 341 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 TBC1D10BQ4KMP7 808 aaPredicted RBP20.23■□□□□ 0.83
SPAST-203ENST00000615843 KCTD6Q8NC69 237 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 CHP1Q99653 195 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 ZNF577Q9BSK1 485 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 CCDC68Q9H2F9 335 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 APOBEC2Q9Y235 224 aaKnown RBP20.23■□□□□ 0.83
SPAST-203ENST00000615843 INPP1P49441 399 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 SPATA21Q7Z572 469 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 DEPDC1BQ8WUY9 529 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.23■□□□□ 0.83
SPAST-203ENST00000615843 TTC25Q96NG3 672 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 NUB1Q9Y5A7 615 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 NEDD4P46934 1319 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 ESYT2A0FGR8 921 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 POLGP54098 1239 aaPredicted RBP20.23■□□□□ 0.83
SPAST-203ENST00000615843 ARL4CP56559 192 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 TSGA10IPQ3SY00 556 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 SLC30A9Q6PML9 568 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 STAG2Q8N3U4 1231 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 TC2NQ8N9U0 490 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 HNRNPLLQ8WVV9 542 aaKnown RBP20.23■□□□□ 0.83
SPAST-203ENST00000615843 MID2Q9UJV3 735 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 FIS1Q9Y3D6 152 aa20.23■□□□□ 0.83
SPAST-203ENST00000615843 CDC27P30260 824 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 BYSLQ13895 437 aaKnown RBP20.22■□□□□ 0.83
SPAST-203ENST00000615843 STAMBPL1Q96FJ0 436 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 WDR11Q9BZH6 1224 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 LIMA1Q9UHB6 759 aaKnown RBP20.22■□□□□ 0.83
SPAST-203ENST00000615843 RFX7Q2KHR2 1363 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 USP17L2Q6R6M4 530 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 L2HGDHQ9H9P8 463 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.22■□□□□ 0.83
SPAST-203ENST00000615843 ARL2BPQ9Y2Y0 163 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 UBN2Q6ZU65 1347 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 PVALEFA0A1B0GWK0 134 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 STXBP3O00186 592 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 GPC5P78333 572 aa20.22■□□□□ 0.83
SPAST-203ENST00000615843 KCNH2Q12809 1159 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms