RNA–Protein interactions for RNA: ENST00000615497.4

TBC1D1-219, Transcript of TBC1 domain family member 1, humanhuman

TSL 2 BASIC

Gene TBC1D1, Length 2,383 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-219ENST00000615497 ZNF131P52739 623 aa17.11■□□□□ 0.33
TBC1D1-219ENST00000615497 SNRNP48Q6IEG0 339 aaKnown RBP17.11■□□□□ 0.33
TBC1D1-219ENST00000615497 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
TBC1D1-219ENST00000615497 ANKRD7Q92527 254 aa17.11■□□□□ 0.33
TBC1D1-219ENST00000615497 PCMTD1Q96MG8 357 aaPredicted RBP17.11■□□□□ 0.33
TBC1D1-219ENST00000615497 CTDP1Q9Y5B0 961 aaPredicted RBP17.11■□□□□ 0.33
TBC1D1-219ENST00000615497 SNCAIPQ9Y6H5 919 aa17.11■□□□□ 0.33
TBC1D1-219ENST00000615497 NR2F2P24468 414 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 NMT1P30419 496 aaKnown RBP17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 MAPK7Q13164 816 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 SUPT20HL1Q3ZLR7 823 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 CCDC40Q4G0X9 1142 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 MIER3Q7Z3K6 550 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 DAW1Q8N136 415 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 PNMA2Q9UL42 364 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 ZMYM2Q9UBW7 1377 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 PDXKO00764 312 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 TGFB1I1O43294 461 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 MYCLP12524 364 aaPredicted RBP17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 HNRNPH3P31942 346 aaKnown RBP17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 OAZ1P54368 228 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 VGLL4Q14135 290 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 ZC2HC1CQ53FD0 456 aaPredicted RBP17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 BAP1Q92560 729 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 MMRN2Q9H8L6 949 aa17.1■□□□□ 0.33
TBC1D1-219ENST00000615497 ATP2A1O14983 1001 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 NOL4O94818 638 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 SLU7O95391 586 aaKnown RBP17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 GCNT3O95395 438 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 CCNE2O96020 404 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 GAP43P17677 238 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 VSIG10LQ86VR7 867 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 PLAGL2Q9UPG8 496 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 SPDYE16A6NNV3 312 aaPredicted RBP17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 RGS20O76081 388 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 GNA14O95837 355 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 P4HBP07237 508 aaKnown RBP17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 HERVK_113P62684 666 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 UGCGQ16739 394 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 MYCT1Q8N699 235 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 PARVGQ9HBI0 331 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 TMEM51Q9NW97 253 aa17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 V9GYY5 206 aaPredicted RBP17.09■□□□□ 0.33
TBC1D1-219ENST00000615497 ADM5C9JUS6 153 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 CETN3O15182 167 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 AKAP3O75969 853 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 FAM13AO94988 1023 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 PLEKP08567 350 aaPredicted RBP17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 CDK17Q00537 523 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 APBA1Q02410 837 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 SH3D19Q5HYK7 790 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 ARHGEF16Q5VV41 709 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 KSR1Q8IVT5 923 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 NEK9Q8TD19 979 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 NHEJ1Q9H9Q4 299 aaPredicted RBP17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 TYW1Q9NV66 732 aaKnown RBP17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 TRIM10Q9UDY6 481 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 TFR2Q9UP52 801 aa17.08■□□□□ 0.33
TBC1D1-219ENST00000615497 PEX10O60683 326 aa17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 URI1O94763 535 aaPredicted RBP17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 NR3C2P08235 984 aa17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 YBX3P16989 372 aaKnown RBP eCLIP17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 GUCY2CP25092 1073 aa17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 CASQ1P31415 396 aa17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 CASP4P49662 377 aa17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 ZNF720Q7Z2F6 126 aa17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 ZSWIM4Q9H7M6 989 aa17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 ADARB2Q9NS39 739 aaKnown RBP17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 TBC1D22BQ9NU19 505 aa17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 KCND2Q9NZV8 630 aa17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 RNF181Q9P0P0 153 aa17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.08■□□□□ 0.32
TBC1D1-219ENST00000615497 WDR90Q96KV7 1748 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 TMEM150BA6NC51 233 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 MAP3K9P80192 1104 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 DPY19L2P1Q6NXN4 242 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 IQCDQ96DY2 449 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 ERO1AQ96HE7 468 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 CRACR2AQ9BSW2 395 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 TEX13BQ9BXU2 312 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 A1CFQ9NQ94 594 aaKnown RBP17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 ARHGAP20Q9P2F6 1191 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 ODF2LQ9ULJ1 636 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 PAPPA2Q9BXP8 1791 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 PTPRFP10586 1907 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 ZNF263O14978 683 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 EIF3DO15371 548 aaKnown RBP eCLIP17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 NR3C1P04150 777 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 TSR1Q2NL82 804 aaKnown RBP17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 TREML2Q5T2D2 321 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 PADI6Q6TGC4 694 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 SH2D3AQ9BRG2 576 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 STRA6Q9BX79 667 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 TMOD4Q9NZQ9 345 aa17.07■□□□□ 0.32
TBC1D1-219ENST00000615497 TESPA1A2RU30 521 aaPredicted RBP17.06■□□□□ 0.32
TBC1D1-219ENST00000615497 ARHGEF35A5YM69 484 aa17.06■□□□□ 0.32
TBC1D1-219ENST00000615497 RCCD1A6NED2 376 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms