RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 PPP2R3BQ9Y5P8 575 aa21.12■□□□□ 0.97
MMP28-204ENST00000615136 WDR90Q96KV7 1748 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 PRPF6O94906 941 aaKnown RBP21.11■□□□□ 0.97
MMP28-204ENST00000615136 ABL1P00519 1130 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 FKBP3Q00688 224 aaKnown RBP21.11■□□□□ 0.97
MMP28-204ENST00000615136 GABPB1Q06547 395 aaPredicted RBP21.11■□□□□ 0.97
MMP28-204ENST00000615136 KCNA1Q09470 495 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 MAN2A1Q16706 1144 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 FIGNQ5HY92 759 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 FOXR2Q6PJQ5 311 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 RMDN3Q96TC7 470 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 IKZF4Q9H2S9 585 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 JADE2Q9NQC1 790 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 PXMP2Q9NR77 195 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 PEX10O60683 326 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 ATP9AO75110 1047 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 VGLL4Q14135 290 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 NOL9Q5SY16 702 aaKnown RBP21.11■□□□□ 0.97
MMP28-204ENST00000615136 KRT26Q7Z3Y9 468 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 CEP112Q8N8E3 955 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 NAPGQ99747 312 aaPredicted RBP21.11■□□□□ 0.97
MMP28-204ENST00000615136 PDCD2LQ9BRP1 358 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 SIK3Q9Y2K2 1263 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 SNCAIPQ9Y6H5 919 aa21.11■□□□□ 0.97
MMP28-204ENST00000615136 C19orf81C9J6K1 198 aa21.1■□□□□ 0.97
MMP28-204ENST00000615136 PNMA6AP0CW24 399 aaPredicted RBP21.1■□□□□ 0.97
MMP28-204ENST00000615136 TRIM21P19474 475 aaKnown RBP21.1■□□□□ 0.97
MMP28-204ENST00000615136 MTMR1Q13613 665 aa21.1■□□□□ 0.97
MMP28-204ENST00000615136 CATSPERGQ6ZRH7 1159 aa21.1■□□□□ 0.97
MMP28-204ENST00000615136 ZNF662Q6ZS27 426 aa21.1■□□□□ 0.97
MMP28-204ENST00000615136 COL4A3BPQ9Y5P4 624 aa21.1■□□□□ 0.97
MMP28-204ENST00000615136 A0A1W2PQJ5 194 aa21.09■□□□□ 0.97
MMP28-204ENST00000615136 FGFR1OPO95684 399 aaKnown RBP21.09■□□□□ 0.97
MMP28-204ENST00000615136 CHMP4BP1P59074 171 aa21.09■□□□□ 0.97
MMP28-204ENST00000615136 ZBED6P86452 979 aa21.09■□□□□ 0.97
MMP28-204ENST00000615136 COG2Q14746 738 aa21.09■□□□□ 0.97
MMP28-204ENST00000615136 TSR1Q2NL82 804 aaKnown RBP21.09■□□□□ 0.97
MMP28-204ENST00000615136 SUPT20HL1Q3ZLR7 823 aa21.09■□□□□ 0.97
MMP28-204ENST00000615136 NIPA1Q7RTP0 329 aa21.09■□□□□ 0.97
MMP28-204ENST00000615136 IQCDQ96DY2 449 aa21.09■□□□□ 0.97
MMP28-204ENST00000615136 PCMTD1Q96MG8 357 aaPredicted RBP21.09■□□□□ 0.97
MMP28-204ENST00000615136 HAUS4Q9H6D7 363 aa21.09■□□□□ 0.97
MMP28-204ENST00000615136 MAP3K20Q9NYL2 800 aaKnown RBP21.09■□□□□ 0.97
MMP28-204ENST00000615136 TBCAO75347 108 aaKnown RBP21.09■□□□□ 0.97
MMP28-204ENST00000615136 FKBP15Q5T1M5 1219 aa21.09■□□□□ 0.97
MMP28-204ENST00000615136 MIER3Q7Z3K6 550 aa21.09■□□□□ 0.97
MMP28-204ENST00000615136 ZC3H3Q8IXZ2 948 aaKnown RBP21.09■□□□□ 0.97
MMP28-204ENST00000615136 SYT17Q9BSW7 474 aa21.09■□□□□ 0.97
MMP28-204ENST00000615136 OTOFQ9HC10 1997 aa21.08■□□□□ 0.97
MMP28-204ENST00000615136 ATP8B1O43520 1251 aa21.08■□□□□ 0.97
MMP28-204ENST00000615136 NMT1P30419 496 aaKnown RBP21.08■□□□□ 0.97
MMP28-204ENST00000615136 SMCR8Q8TEV9 937 aaPredicted RBP21.08■□□□□ 0.97
MMP28-204ENST00000615136 NACC1Q96RE7 527 aa21.08■□□□□ 0.97
MMP28-204ENST00000615136 EPC1Q9H2F5 836 aa21.08■□□□□ 0.97
MMP28-204ENST00000615136 ADARB2Q9NS39 739 aaKnown RBP21.08■□□□□ 0.97
MMP28-204ENST00000615136 SPDYE16A6NNV3 312 aaPredicted RBP21.07■□□□□ 0.96
MMP28-204ENST00000615136 FDX1P10109 184 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 HERVK_113P62684 666 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 ADAM9Q13443 819 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 KNOP1Q1ED39 458 aaKnown RBP21.07■□□□□ 0.96
MMP28-204ENST00000615136 CCDC40Q4G0X9 1142 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 ARHGEF16Q5VV41 709 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 KSR1Q8IVT5 923 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 KCTD17Q8N5Z5 321 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 FIZ1Q96SL8 496 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 FAM207AQ9NSI2 230 aaPredicted RBP21.07■□□□□ 0.96
MMP28-204ENST00000615136 PAPPA2Q9BXP8 1791 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 GCNT3O95395 438 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 TUBB4BP68371 445 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 CDK17Q00537 523 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 AMPD2Q01433 879 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 KCNMA1Q12791 1236 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 WHAMMP3Q1A5X7 153 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 ZC2HC1CQ53FD0 456 aaPredicted RBP21.07■□□□□ 0.96
MMP28-204ENST00000615136 TREML2Q5T2D2 321 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 CC2D1AQ6P1N0 951 aaPredicted RBP21.07■□□□□ 0.96
MMP28-204ENST00000615136 CEP63Q96MT8 703 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 SH2D3AQ9BRG2 576 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 PARD6BQ9BYG5 372 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 TMOD4Q9NZQ9 345 aa21.07■□□□□ 0.96
MMP28-204ENST00000615136 PTPRFP10586 1907 aa21.06■□□□□ 0.96
MMP28-204ENST00000615136 TESPA1A2RU30 521 aaPredicted RBP21.06■□□□□ 0.96
MMP28-204ENST00000615136 TMEM150BA6NC51 233 aa21.06■□□□□ 0.96
MMP28-204ENST00000615136 NR2F2P24468 414 aa21.06■□□□□ 0.96
MMP28-204ENST00000615136 UGCGQ16739 394 aa21.06■□□□□ 0.96
MMP28-204ENST00000615136 GPIHBP1Q8IV16 184 aa21.06■□□□□ 0.96
MMP28-204ENST00000615136 CCDC170Q8IYT3 715 aa21.06■□□□□ 0.96
MMP28-204ENST00000615136 MYCT1Q8N699 235 aa21.06■□□□□ 0.96
MMP28-204ENST00000615136 TRAF3IP3Q9Y228 551 aa21.06■□□□□ 0.96
MMP28-204ENST00000615136 ASTN1O14525 1302 aa21.06■□□□□ 0.96
MMP28-204ENST00000615136 FAM13AO94988 1023 aa21.05■□□□□ 0.96
MMP28-204ENST00000615136 KIF20AO95235 890 aa21.05■□□□□ 0.96
MMP28-204ENST00000615136 CCNE2O96020 404 aa21.05■□□□□ 0.96
MMP28-204ENST00000615136 MUTP22033 750 aa21.05■□□□□ 0.96
MMP28-204ENST00000615136 CYLC1P35663 651 aaPredicted RBP21.05■□□□□ 0.96
MMP28-204ENST00000615136 KRT83P78385 493 aa21.05■□□□□ 0.96
MMP28-204ENST00000615136 BMT2Q1RMZ1 405 aa21.05■□□□□ 0.96
MMP28-204ENST00000615136 EDRF1Q3B7T1 1238 aa21.05■□□□□ 0.96
MMP28-204ENST00000615136 TRIM59Q8IWR1 403 aa21.05■□□□□ 0.96
MMP28-204ENST00000615136 SAMD3Q8N6K7 520 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms