RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 ATG7O95352 703 aa24.69■■□□□ 1.54
CBWD1-223ENST00000613988 MRPS6P82932 125 aaKnown RBP24.69■■□□□ 1.54
CBWD1-223ENST00000613988 AKAP17AQ02040 695 aaKnown RBP24.69■■□□□ 1.54
CBWD1-223ENST00000613988 IER5Q5VY09 327 aa24.69■■□□□ 1.54
CBWD1-223ENST00000613988 PLA2G4DQ86XP0 818 aa24.69■■□□□ 1.54
CBWD1-223ENST00000613988 FBXL16Q8N461 479 aa24.69■■□□□ 1.54
CBWD1-223ENST00000613988 SAMD11Q96NU1 681 aa24.69■■□□□ 1.54
CBWD1-223ENST00000613988 ZMYND12Q9H0C1 365 aa24.69■■□□□ 1.54
CBWD1-223ENST00000613988 ESYT2A0FGR8 921 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 POTEB3A0JP26 581 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 FAM86B1E9PN63 330 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 DDX39AO00148 427 aaKnown RBP24.68■■□□□ 1.54
CBWD1-223ENST00000613988 FAM86B2P0C5J1 330 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 AK2P54819 239 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 EPC2Q52LR7 807 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 FBXO47Q5MNV8 452 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 MCTP2Q6DN12 878 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 POTEBQ6S5H4 581 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 PHKBQ93100 1093 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 ZSCAN31Q96LW9 406 aaPredicted RBP24.68■■□□□ 1.54
CBWD1-223ENST00000613988 LIMCH1Q9UPQ0 1083 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 NID2Q14112 1375 aa24.68■■□□□ 1.54
CBWD1-223ENST00000613988 CYP3A4P08684 503 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 GNA11P29992 359 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 SLC26A2P50443 739 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 PKN1Q16512 942 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 TSHZ1Q6ZSZ6 1077 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 REXO1Q8N1G1 1221 aaKnown RBP24.67■■□□□ 1.54
CBWD1-223ENST00000613988 TRAPPC12Q8WVT3 735 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 TMX3Q96JJ7 454 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 AGXT2Q9BYV1 514 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 PCDHA2Q9Y5H9 948 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 M0QZ92 97 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 ENPP3O14638 875 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 BACH1O14867 736 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 CCNE2O96020 404 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 HSP90AA1P07900 732 aaKnown RBP24.67■■□□□ 1.54
CBWD1-223ENST00000613988 FAM160B1Q5W0V3 765 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 ABHD15Q6UXT9 468 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 CRYGNQ8WXF5 182 aa24.67■■□□□ 1.54
CBWD1-223ENST00000613988 NECAB3Q96P71 396 aaPredicted RBP24.67■■□□□ 1.54
CBWD1-223ENST00000613988 IGLV3-22A0A075B6J6 115 aa24.66■■□□□ 1.54
CBWD1-223ENST00000613988 IGKV6D-21A0A0A0MT36 114 aa24.66■■□□□ 1.54
CBWD1-223ENST00000613988 IPO5O00410 1097 aaKnown RBP24.66■■□□□ 1.54
CBWD1-223ENST00000613988 ADAMTS3O15072 1205 aa24.66■■□□□ 1.54
CBWD1-223ENST00000613988 TMEM62Q0P6H9 643 aa24.66■■□□□ 1.54
CBWD1-223ENST00000613988 TMEM192Q8IY95 271 aa24.66■■□□□ 1.54
CBWD1-223ENST00000613988 UIMC1Q96RL1 719 aa24.66■■□□□ 1.54
CBWD1-223ENST00000613988 AGO3Q9H9G7 860 aaKnown RBP24.66■■□□□ 1.54
CBWD1-223ENST00000613988 SH2B1Q9NRF2 756 aaPredicted RBP24.66■■□□□ 1.54
CBWD1-223ENST00000613988 TRPV2Q9Y5S1 764 aa24.66■■□□□ 1.54
CBWD1-223ENST00000613988 DHX15O43143 795 aaKnown RBP24.65■■□□□ 1.54
CBWD1-223ENST00000613988 PPFIA3O75145 1194 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 CD52P31358 61 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 GPM6BQ13491 265 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 CUL4AQ13619 759 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 NTRK3Q16288 839 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 PTPROQ16827 1216 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 MIS18BP1Q6P0N0 1132 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 MTHFD1LQ6UB35 978 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 FIBCD1Q8N539 461 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 BICD2Q8TD16 824 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 ZNF577Q9BSK1 485 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 SLC26A6Q9BXS9 759 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 RNF26Q9BY78 433 aaPredicted RBP24.65■■□□□ 1.54
CBWD1-223ENST00000613988 ZNF302Q9NR11 478 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 SQORQ9Y6N5 450 aa24.65■■□□□ 1.54
CBWD1-223ENST00000613988 SMIM35A0A1B0GVV1 85 aa24.64■■□□□ 1.53
CBWD1-223ENST00000613988 H3BNC9 293 aa24.64■■□□□ 1.53
CBWD1-223ENST00000613988 HBP1O60381 514 aa24.64■■□□□ 1.53
CBWD1-223ENST00000613988 PDIA3P30101 505 aaKnown RBP24.64■■□□□ 1.53
CBWD1-223ENST00000613988 CCT2P78371 535 aaKnown RBP24.64■■□□□ 1.53
CBWD1-223ENST00000613988 PDXDC2PQ6P474 469 aa24.64■■□□□ 1.53
CBWD1-223ENST00000613988 NME8Q8N427 588 aa24.64■■□□□ 1.53
CBWD1-223ENST00000613988 MRPL38Q96DV4 380 aaKnown RBP24.64■■□□□ 1.53
CBWD1-223ENST00000613988 TBC1D22BQ9NU19 505 aa24.64■■□□□ 1.53
CBWD1-223ENST00000613988 IFNAR1P17181 557 aa24.63■■□□□ 1.53
CBWD1-223ENST00000613988 KLRC1P26715 233 aa24.63■■□□□ 1.53
CBWD1-223ENST00000613988 SETQ01105 290 aaPredicted RBP24.63■■□□□ 1.53
CBWD1-223ENST00000613988 SWSAP1Q6NVH7 229 aa24.63■■□□□ 1.53
CBWD1-223ENST00000613988 CCDC60Q8IWA6 550 aaPredicted RBP24.63■■□□□ 1.53
CBWD1-223ENST00000613988 CCDC148Q8NFR7 591 aa24.63■■□□□ 1.53
CBWD1-223ENST00000613988 ATP8B4Q8TF62 1192 aa24.63■■□□□ 1.53
CBWD1-223ENST00000613988 INTS4Q96HW7 963 aaKnown RBP24.63■■□□□ 1.53
CBWD1-223ENST00000613988 CELF4Q9BZC1 486 aaKnown RBP24.63■■□□□ 1.53
CBWD1-223ENST00000613988 COL4A6Q14031 1691 aa24.62■■□□□ 1.53
CBWD1-223ENST00000613988 EVCP57679 992 aa24.62■■□□□ 1.53
CBWD1-223ENST00000613988 PRR16Q569H4 304 aa24.62■■□□□ 1.53
CBWD1-223ENST00000613988 RASGRP4Q8TDF6 673 aa24.62■■□□□ 1.53
CBWD1-223ENST00000613988 FTHL17Q9BXU8 183 aa24.62■■□□□ 1.53
CBWD1-223ENST00000613988 NCOA5Q9HCD5 579 aaKnown RBP24.62■■□□□ 1.53
CBWD1-223ENST00000613988 BRWD1Q9NSI6 2320 aa24.62■■□□□ 1.53
CBWD1-223ENST00000613988 NLRC5Q86WI3 1866 aa24.62■■□□□ 1.53
CBWD1-223ENST00000613988 KRT76Q01546 638 aa24.61■■□□□ 1.53
CBWD1-223ENST00000613988 TOB2Q14106 344 aaPredicted RBP24.61■■□□□ 1.53
CBWD1-223ENST00000613988 ZNF484Q5JVG2 852 aa24.61■■□□□ 1.53
CBWD1-223ENST00000613988 CKAP2LQ8IYA6 745 aa24.61■■□□□ 1.53
CBWD1-223ENST00000613988 VPS54Q9P1Q0 977 aa24.61■■□□□ 1.53
CBWD1-223ENST00000613988 TCEAL9Q9UHQ7 104 aa24.61■■□□□ 1.53
CBWD1-223ENST00000613988 PADI3Q9ULW8 664 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms