RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 GLI1P08151 1106 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 CARSP49589 748 aaKnown RBP12.29□□□□□ -0.44
ATF3-211ENST00000613954 GUCY2DQ02846 1103 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 DRP2Q13474 957 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 PLCB4Q15147 1175 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 NAB2Q15742 525 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 TMEM266Q2M3C6 531 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 SFMBT2Q5VUG0 894 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 HGSNATQ68CP4 663 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 TTC19Q6DKK2 380 aaPredicted RBP12.29□□□□□ -0.44
ATF3-211ENST00000613954 LRIG3Q6UXM1 1119 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 C3orf20Q8ND61 904 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 LARP4BQ92615 738 aaKnown RBP12.29□□□□□ -0.44
ATF3-211ENST00000613954 CDK5RAP3Q96JB5 506 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 SALL4Q9UJQ4 1053 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 CAPN7Q9Y6W3 813 aa12.29□□□□□ -0.44
ATF3-211ENST00000613954 BUB1O43683 1085 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 TBC1D12O60347 775 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 GNA14O95837 355 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 GH2P01242 217 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 KRT14P02533 472 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 SLC1A4P43007 532 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
ATF3-211ENST00000613954 CDC37Q16543 378 aaPredicted RBP12.28□□□□□ -0.44
ATF3-211ENST00000613954 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 NAA35Q5VZE5 725 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 SLFN13Q68D06 897 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 KCTD16Q68DU8 428 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 PPP4R3AQ6IN85 833 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 SIAH1Q8IUQ4 282 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 GMCL1P1Q8NEA9 526 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 IFT81Q8WYA0 676 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 RNPC3Q96LT9 517 aaKnown RBP12.28□□□□□ -0.44
ATF3-211ENST00000613954 TACO1Q9BSH4 297 aaKnown RBP12.28□□□□□ -0.44
ATF3-211ENST00000613954 MMTAG2Q9BU76 263 aaKnown RBP12.28□□□□□ -0.44
ATF3-211ENST00000613954 SPON1Q9HCB6 807 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 A1CFQ9NQ94 594 aaKnown RBP12.28□□□□□ -0.44
ATF3-211ENST00000613954 EHD2Q9NZN4 543 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 SYNPO2Q9UMS6 1093 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 PCDHGC5Q9Y5F6 944 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 PNMA6FA0A0J9YX94 578 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 ESYT2A0FGR8 921 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 SMCO2A6NFE2 343 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 PALMO75781 387 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 HSPA9P38646 679 aaKnown RBP12.28□□□□□ -0.44
ATF3-211ENST00000613954 MDH1P40925 334 aaKnown RBP12.28□□□□□ -0.44
ATF3-211ENST00000613954 TNNI2P48788 182 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 FNTAP49354 379 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 GMPSP49915 693 aaPredicted RBP12.28□□□□□ -0.44
ATF3-211ENST00000613954 ATP1A2P50993 1020 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 PRELPP51888 382 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 GSCP56915 257 aaPredicted RBP12.28□□□□□ -0.44
ATF3-211ENST00000613954 RRP1BQ14684 758 aaKnown RBP12.28□□□□□ -0.44
ATF3-211ENST00000613954 PTGISQ16647 500 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 C10orf76Q5T2E6 689 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 MEI1Q5TIA1 1274 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 FBXW10Q5XX13 1052 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 LRRC55Q6ZSA7 311 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 ADGRF4Q8IZF3 695 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 ZNF473Q8WTR7 871 aaKnown RBP12.28□□□□□ -0.44
ATF3-211ENST00000613954 TANGO6Q9C0B7 1094 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 TMEM39BQ9GZU3 492 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 JMJD4Q9H9V9 463 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 SMARCAL1Q9NZC9 954 aa12.28□□□□□ -0.44
ATF3-211ENST00000613954 MYMKA6NI61 221 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 FAM107AO95990 144 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 JAG1P78504 1218 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 MRPS25P82663 173 aaKnown RBP12.27□□□□□ -0.44
ATF3-211ENST00000613954 FKBP3Q00688 224 aaKnown RBP12.27□□□□□ -0.44
ATF3-211ENST00000613954 GRB10Q13322 594 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 CUL1Q13616 776 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 PDIA5Q14554 519 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 SLC18A3Q16572 532 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 TTBK2Q6IQ55 1244 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 KCNV1Q6PIU1 500 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 KCTD1Q719H9 257 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 SH2D3CQ8N5H7 860 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 ANKRD13CQ8N6S4 541 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 TAF4BQ92750 862 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 LRRC45Q96CN5 670 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 MS4A14Q96JA4 679 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 KRT12Q99456 494 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 RABEP2Q9H5N1 569 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 PLCB1Q9NQ66 1216 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 BLOC1S4Q9NUP1 217 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 COL4A3BPQ9Y5P4 624 aa12.27□□□□□ -0.44
ATF3-211ENST00000613954 BTNL10A8MVZ5 291 aa12.27□□□□□ -0.45
ATF3-211ENST00000613954 NKRFO15226 690 aaKnown RBP eCLIP12.27□□□□□ -0.45
ATF3-211ENST00000613954 IFI16Q16666 785 aaKnown RBP12.27□□□□□ -0.45
ATF3-211ENST00000613954 FAM83BQ5T0W9 1011 aa12.27□□□□□ -0.45
ATF3-211ENST00000613954 PPP1R18Q6NYC8 613 aa12.27□□□□□ -0.45
ATF3-211ENST00000613954 NLRP14Q86W24 1093 aa12.27□□□□□ -0.45
ATF3-211ENST00000613954 MICALL2Q8IY33 904 aa12.27□□□□□ -0.45
ATF3-211ENST00000613954 PIAS4Q8N2W9 510 aaPredicted RBP12.27□□□□□ -0.45
ATF3-211ENST00000613954 TBCKQ8TEA7 893 aa12.27□□□□□ -0.45
ATF3-211ENST00000613954 PIK3R5Q8WYR1 880 aa12.27□□□□□ -0.45
ATF3-211ENST00000613954 HPS3Q969F9 1004 aa12.27□□□□□ -0.45
ATF3-211ENST00000613954 GMCL1Q96IK5 515 aa12.27□□□□□ -0.45
ATF3-211ENST00000613954 CEP63Q96MT8 703 aa12.27□□□□□ -0.45
ATF3-211ENST00000613954 INPP4AQ96PE3 977 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms