RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 SERINC5Q86VE9 423 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 TRAPPC12Q8WVT3 735 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 FOXD4L4Q8WXT5 416 aaPredicted RBP18.66■□□□□ 0.58
IRF1-211ENST00000613424 WNT8BQ93098 351 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 DYDC2Q96IM9 177 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 LBHD1Q9BQE6 289 aaPredicted RBP18.66■□□□□ 0.58
IRF1-211ENST00000613424 EIF2AK1Q9BQI3 630 aaKnown RBP18.66■□□□□ 0.58
IRF1-211ENST00000613424 UMODL1Q5DID0 1318 aa18.66■□□□□ 0.58
IRF1-211ENST00000613424 ZBTB42B2RXF5 422 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 SLITRK3O94933 977 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 STBD1O95210 358 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 OATP04181 439 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 ZSCAN22P10073 491 aaPredicted RBP18.65■□□□□ 0.58
IRF1-211ENST00000613424 PRPHP41219 470 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 FXR2P51116 673 aaKnown RBP eCLIP18.65■□□□□ 0.58
IRF1-211ENST00000613424 ATP2C1P98194 919 aaPredicted RBP18.65■□□□□ 0.58
IRF1-211ENST00000613424 BFSP2Q13515 415 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 PKP1Q13835 747 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 CTTNQ14247 550 aaKnown RBP18.65■□□□□ 0.58
IRF1-211ENST00000613424 IL17AQ16552 155 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 TMEM266Q2M3C6 531 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 PRPF38BQ5VTL8 546 aaKnown RBP18.65■□□□□ 0.58
IRF1-211ENST00000613424 MFSD5Q6N075 450 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 CAGE1Q8TC20 777 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 ZBTB10Q96DT7 871 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 FAM167AQ96KS9 214 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 HSD17B14Q9BPX1 270 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 WRAP73Q9P2S5 460 aaPredicted RBP18.65■□□□□ 0.58
IRF1-211ENST00000613424 TUBE1Q9UJT0 475 aa18.65■□□□□ 0.58
IRF1-211ENST00000613424 MBLAC1A4D2B0 266 aaPredicted RBP18.64■□□□□ 0.57
IRF1-211ENST00000613424 DDX11L8A8MPP1 907 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 PITPNM1O00562 1244 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 DKC1O60832 514 aaKnown RBP eCLIP18.64■□□□□ 0.57
IRF1-211ENST00000613424 CCL23P55773 120 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 PDIA5Q14554 519 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 SF3A1Q15459 793 aaKnown RBP18.64■□□□□ 0.57
IRF1-211ENST00000613424 TRIM71Q2Q1W2 868 aaKnown RBP18.64■□□□□ 0.57
IRF1-211ENST00000613424 XKR3Q5GH77 459 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 MTHFD1LQ6UB35 978 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 DTHD1Q6ZMT9 781 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 RUFY4Q6ZNE9 571 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 TPH2Q8IWU9 490 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 CCDC155Q8N6L0 562 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 RETREG2Q8NC44 543 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 GDF15Q99988 308 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 LXNQ9BS40 222 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 WNT8AQ9H1J5 351 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 CLIC4Q9Y696 253 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 COL1A2P08123 1366 aa18.64■□□□□ 0.57
IRF1-211ENST00000613424 CKBP12277 381 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 KLRC1P26715 233 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 CYP4A11Q02928 519 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 RBL2Q08999 1139 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 C4orf19Q8IY42 314 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 TMEM199Q8N511 208 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 IGSF22Q8N9C0 903 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 SCLYQ96I15 445 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 NIFKQ9BYG3 293 aaKnown RBP18.63■□□□□ 0.57
IRF1-211ENST00000613424 FTOQ9C0B1 505 aaKnown RBP eCLIP18.63■□□□□ 0.57
IRF1-211ENST00000613424 ZSWIM4Q9H7M6 989 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 CEP131Q9UPN4 1083 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 PCDHA2Q9Y5H9 948 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 LTBP2Q14767 1821 aa18.63■□□□□ 0.57
IRF1-211ENST00000613424 TMEM150BA6NC51 233 aa18.62■□□□□ 0.57
IRF1-211ENST00000613424 BMP15O95972 392 aa18.62■□□□□ 0.57
IRF1-211ENST00000613424 F13A1P00488 732 aa18.62■□□□□ 0.57
IRF1-211ENST00000613424 IQCF3P0C7M6 154 aa18.62■□□□□ 0.57
IRF1-211ENST00000613424 THPOP40225 353 aa18.62■□□□□ 0.57
IRF1-211ENST00000613424 ZNF618Q5T7W0 954 aa18.62■□□□□ 0.57
IRF1-211ENST00000613424 ARL6IP4Q66PJ3 421 aaKnown RBP18.62■□□□□ 0.57
IRF1-211ENST00000613424 ANO5Q75V66 913 aa18.62■□□□□ 0.57
IRF1-211ENST00000613424 NEK9Q8TD19 979 aa18.62■□□□□ 0.57
IRF1-211ENST00000613424 LRWD1Q9UFC0 647 aa18.62■□□□□ 0.57
IRF1-211ENST00000613424 SEPT9Q9UHD8 586 aaPredicted RBP18.62■□□□□ 0.57
IRF1-211ENST00000613424 ZBTB39O15060 712 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 MED24O75448 989 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 SPATA31C1P0DKV0 1188 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 CSF2RAP15509 400 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 SELPP16109 830 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 CEBPZQ03701 1054 aaKnown RBP18.61■□□□□ 0.57
IRF1-211ENST00000613424 FPGSQ05932 587 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 TARBP2Q15633 366 aaKnown RBP18.61■□□□□ 0.57
IRF1-211ENST00000613424 TAF2Q6P1X5 1199 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 CHRDL2Q6WN34 429 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 CATSPER3Q86XQ3 398 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 ERMNQ8TAM6 284 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 DNAJB3Q8WWF6 145 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 USP28Q96RU2 1077 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 SH2D3AQ9BRG2 576 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 POLR3CQ9BUI4 534 aaPredicted RBP18.61■□□□□ 0.57
IRF1-211ENST00000613424 RAB34Q9BZG1 259 aa18.61■□□□□ 0.57
IRF1-211ENST00000613424 SMIM35A0A1B0GVV1 85 aa18.6■□□□□ 0.57
IRF1-211ENST00000613424 VWA3AA6NCI4 1184 aa18.6■□□□□ 0.57
IRF1-211ENST00000613424 LYPLA2O95372 231 aa18.6■□□□□ 0.57
IRF1-211ENST00000613424 C22orf31O95567 290 aa18.6■□□□□ 0.57
IRF1-211ENST00000613424 BRD1O95696 1058 aa18.6■□□□□ 0.57
IRF1-211ENST00000613424 RPA1P27694 616 aa18.6■□□□□ 0.57
IRF1-211ENST00000613424 YWHABP31946 246 aaKnown RBP18.6■□□□□ 0.57
IRF1-211ENST00000613424 BMP8BP34820 402 aa18.6■□□□□ 0.57
IRF1-211ENST00000613424 PPIGQ13427 754 aaKnown RBP eCLIP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms