RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 NINQ8N4C6 2090 aa11.61□□□□□ -0.55
CNTNAP3B-211ENST00000612828 RAD50Q92878 1312 aa11.61□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ACTN4O43707 911 aaKnown RBP11.61□□□□□ -0.55
CNTNAP3B-211ENST00000612828 CYTH3O43739 400 aa11.61□□□□□ -0.55
CNTNAP3B-211ENST00000612828 SOX11P35716 441 aa11.61□□□□□ -0.55
CNTNAP3B-211ENST00000612828 TRAP1Q12931 704 aaKnown RBP11.61□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ELF2Q15723 593 aa11.61□□□□□ -0.55
CNTNAP3B-211ENST00000612828 NFATC2IPQ8NCF5 419 aa11.61□□□□□ -0.55
CNTNAP3B-211ENST00000612828 PTPN22Q9Y2R2 807 aa11.61□□□□□ -0.55
CNTNAP3B-211ENST00000612828 DTNAQ9Y4J8 743 aa11.61□□□□□ -0.55
CNTNAP3B-211ENST00000612828 RBM7Q9Y580 266 aaKnown RBP11.61□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ABCC4O15439 1325 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 F5H423 210 aaPredicted RBP11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 POC1B-GALNT4F8VUJ3 575 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 HSPA8P11142 646 aaKnown RBP11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 STX2P32856 288 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 RAB14P61106 215 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 TNNC1P63316 161 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 SMAD1Q15797 465 aaKnown RBP11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ARHGAP27Q6ZUM4 889 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 KRT78Q8N1N4 520 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 SH3GL1Q99961 368 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 MLPHQ9BV36 600 aaPredicted RBP11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 PAG1Q9NWQ8 432 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 AKT3Q9Y243 479 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 INSRP06213 1382 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 LAMC3Q9Y6N6 1575 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 FAM47DPA6NHR8 397 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 FAM47E-STBD1D6RA91 191 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 LONRF3Q496Y0 759 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 SIRT2Q8IXJ6 389 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 MDM1Q8TC05 714 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 SETDB2Q96T68 719 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ZNF711Q9Y462 761 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ZBTB43O43298 467 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 OCA2Q04671 838 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 NT5DC4Q86YG4 428 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 CCDC60Q8IWA6 550 aaPredicted RBP11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 OR9Q1Q8NGQ5 310 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 MOV10L1Q9BXT6 1211 aaKnown RBP11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 RGS10O43665 173 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 TOMM70O94826 608 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ENO2P09104 434 aaPredicted RBP11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 KRT72Q14CN4 511 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 COLGALT2Q8IYK4 626 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 RUBCNLQ9H714 662 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ANAPC2Q9UJX6 822 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 NDUFAB1O14561 156 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 CDC16Q13042 620 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 SPATA18Q8TC71 538 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 MLXIPQ9HAP2 919 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ARHGAP26Q9UNA1 814 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 DUOX2Q9NRD8 1548 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ATXN3P54252 364 aaPredicted RBP11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 GSTO1P78417 241 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ME3Q16798 604 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ANKS6Q68DC2 871 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 CCDC81Q6ZN84 652 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 DHX32Q7L7V1 743 aaKnown RBP11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 CABLES1Q8TDN4 633 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 SUGCTQ9HAC7 445 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 PYCARDQ9ULZ3 195 aa11.6□□□□□ -0.55
CNTNAP3B-211ENST00000612828 RIMS2Q9UQ26 1411 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 PSMA7O14818 248 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 PUDPQ08623 228 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 TCP11X2Q5H9J9 407 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 CHSY1Q86X52 802 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 JADE3Q92613 823 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 SLC9A7Q96T83 725 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 RTEL1Q9NZ71 1219 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 A0A087WWV3 80 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 TOM1L1O75674 476 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 PSMA3P25788 255 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 YWHAEP62258 255 aaKnown RBP11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 BTNL9Q6UXG8 535 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 HES6Q96HZ4 224 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 CITED4Q96RK1 184 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 WBP11Q9Y2W2 641 aaKnown RBP11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 WDR91A4D1P6 747 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 KCNQ3O43525 872 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 NFICP08651 508 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 POLR2BP30876 1174 aaKnown RBP11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ASIC2Q16515 512 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 KRT28Q7Z3Y7 464 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 SCYL3Q8IZE3 742 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 INPP5DQ92835 1189 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 RHOBTB2Q9BYZ6 727 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 CHMP2BQ9UQN3 213 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 BASP1P80723 227 aaKnown RBP11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 PDE1BQ01064 536 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 SPOPLQ6IQ16 392 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 KIF2CQ99661 725 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 FGFR1OP2Q9NVK5 253 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 SGK1O00141 431 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 RPS6KB1P23443 525 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 NCAPH2Q6IBW4 605 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 PHLDB3Q6NSJ2 640 aa11.59□□□□□ -0.55
CNTNAP3B-211ENST00000612828 ARMC6Q6NXE6 501 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms