RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	TRPC6	Q9Y210	931 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	PCDHA2	Q9Y5H9	948 aa		18.88	■□□□□ 0.61
CCND3-222	ENST00000612455	ZBTB42	B2RXF5	422 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	TBX3	O15119	743 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	CHRNA1	P02708	482 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	RPLP2	P05387	115 aa	Known RBP	18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	COL1A2	P08123	1366 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	JAK3	P52333	1124 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	MGAT3	Q09327	533 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	TRIM29	Q14134	588 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	PLEKHG4	Q58EX7	1191 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	ZNF484	Q5JVG2	852 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	BBX	Q8WY36	941 aa	Predicted RBP	18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	EVPL	Q92817	2033 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	HAS1	Q92839	578 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	OSBPL7	Q9BZF2	842 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	TTYH1	Q9H313	450 aa	Predicted RBP	18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	GABBR1	Q9UBS5	961 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	TCEAL9	Q9UHQ7	104 aa		18.87	■□□□□ 0.61
CCND3-222	ENST00000612455	GBF1	Q92538	1859 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	IGSF9B	Q9UPX0	1349 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	ABHD14A-ACY1	A0A1B0GW23	586 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	ZBBX	A8MT70	800 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	ZNF862	O60290	1169 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	CCNT1	O60563	726 aa	Known RBP	18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	CD2BP2	O95400	341 aa	Known RBP	18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	DNAJB2	P25686	324 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	KLRC1	P26715	233 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	IGBP1	P78318	339 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	MKRN4P	Q13434	485 aa	Predicted RBP	18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	ZNF697	Q5TEC3	545 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	MTHFD1L	Q6UB35	978 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	RSPH3	Q86UC2	560 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	DBF4B	Q8NFT6	615 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	FBXO18	Q8NFZ0	1043 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	TRAPPC12	Q8WVT3	735 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	DNAJB3	Q8WWF6	145 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	GTF3C3	Q9Y5Q9	886 aa		18.86	■□□□□ 0.61
CCND3-222	ENST00000612455	SMIM35	A0A1B0GVV1	85 aa		18.85	■□□□□ 0.61
CCND3-222	ENST00000612455	ATP2A2	P16615	1042 aa	Known RBP	18.85	■□□□□ 0.61
CCND3-222	ENST00000612455	PBX2	P40425	430 aa		18.85	■□□□□ 0.61
CCND3-222	ENST00000612455	MCM2	P49736	904 aa		18.85	■□□□□ 0.61
CCND3-222	ENST00000612455	NME8	Q8N427	588 aa		18.85	■□□□□ 0.61
CCND3-222	ENST00000612455	ZBTB10	Q96DT7	871 aa		18.85	■□□□□ 0.61
CCND3-222	ENST00000612455	TMX3	Q96JJ7	454 aa		18.85	■□□□□ 0.61
CCND3-222	ENST00000612455	C8orf76	Q96K31	380 aa		18.85	■□□□□ 0.61
CCND3-222	ENST00000612455	SLC9A7	Q96T83	725 aa		18.85	■□□□□ 0.61
CCND3-222	ENST00000612455	SAMM50	Q9Y512	469 aa		18.85	■□□□□ 0.61
CCND3-222	ENST00000612455	PTPRS	Q13332	1948 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	SI	P14410	1827 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	EFCAB14	O75071	495 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	CTSH	P09668	335 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	WDR5	P61964	334 aa	Known RBP	18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	PPP2R5C	Q13362	524 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	IKBKE	Q14164	716 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	RAB30	Q15771	203 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	MIER3	Q7Z3K6	550 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	FAM167A	Q96KS9	214 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	NRBP2	Q9NSY0	501 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	VAV3	Q9UKW4	847 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	PCDHA11	Q9Y5I1	949 aa		18.84	■□□□□ 0.61
CCND3-222	ENST00000612455	MYO9B	Q13459	2157 aa		18.83	■□□□□ 0.61
CCND3-222	ENST00000612455	MICAL3	Q7RTP6	2002 aa		18.83	■□□□□ 0.61
CCND3-222	ENST00000612455	RBAK-RBAKDN	I3L0D1	243 aa		18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	EML1	O00423	815 aa		18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	STBD1	O95210	358 aa		18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	FOSB	P53539	338 aa		18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	GUCY1B3	Q02153	619 aa		18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	SAFB	Q15424	915 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	UGCG	Q16739	394 aa		18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	TIFA	Q96CG3	184 aa		18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	GUCD1	Q96NT3	240 aa		18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	FOXP1	Q9H334	677 aa	Predicted RBP	18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	MSRA	Q9UJ68	235 aa		18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	YBX2	Q9Y2T7	364 aa	Known RBP	18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	SQOR	Q9Y6N5	450 aa		18.83	■□□□□ 0.6
CCND3-222	ENST00000612455	LOXHD1	Q8IVV2	1947 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	KDM3A	Q9Y4C1	1321 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	CHD9	Q3L8U1	2897 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	WNT7A	O00755	349 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	CHMP2A	O43633	222 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	C22orf31	O95567	290 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	RABGGTB	P53611	331 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	MRPS6	P82932	125 aa	Known RBP	18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	SPIRE1	Q08AE8	756 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	IER5	Q5VY09	327 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	POTED	Q86YR6	584 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	HERC6	Q8IVU3	1022 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	CKAP2L	Q8IYA6	745 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	SLFN12	Q8IYM2	578 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	KIAA0319L	Q8IZA0	1049 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	FAM184A	Q8NB25	1140 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	SEPT8	Q92599	483 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	NIFK	Q9BYG3	293 aa	Known RBP	18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	ZNF576	Q9H609	170 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	CDY2A	Q9Y6F7	541 aa		18.82	■□□□□ 0.6
CCND3-222	ENST00000612455	OAT	P04181	439 aa		18.81	■□□□□ 0.6
CCND3-222	ENST00000612455	LPIN1	Q14693	890 aa		18.81	■□□□□ 0.6
CCND3-222	ENST00000612455	TARBP2	Q15633	366 aa	Known RBP	18.81	■□□□□ 0.6
CCND3-222	ENST00000612455	FBXO47	Q5MNV8	452 aa		18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms