RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 FXR1P51114 621 aaKnown RBP eCLIP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 MRPS25P82663 173 aaKnown RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 ST3GAL1Q11201 340 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 NR1I3Q14994 352 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 GKAP1Q5VSY0 366 aaPredicted RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 EMBQ6PCB8 327 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 PALM2Q8IXS6 379 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 XXYLT1Q8NBI6 393 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 FUCA2Q9BTY2 467 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 EDEM3Q9BZQ6 932 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 PTPN22Q9Y2R2 807 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 MYOM1P52179 1685 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 K7ERI5 159 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 STXBP3O00186 592 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 DHX9Q08211 1270 aaKnown RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 STK4Q13043 487 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 EEPD1Q7L9B9 569 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 NEK9Q8TD19 979 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 CCDC97Q96F63 343 aaPredicted RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 CHP1Q99653 195 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 SLC5A4Q9NY91 659 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 SEL1LQ9UBV2 794 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 FEM1BQ9UK73 627 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 PDS5AQ29RF7 1337 aaKnown RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 MST1RQ04912 1400 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 GPR75-ASB3A0A0A6YYF3 556 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 ZNF233A6NK53 670 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 M0QZ92 97 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 PDHBP11177 359 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 KLRK1P26718 216 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 MAN1A1P33908 653 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 CCT5P48643 541 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 PPP4CP60510 307 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 GFPT1Q06210 699 aaPredicted RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 DMTNQ08495 405 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 KRT81Q14533 505 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 RBM43Q6ZSC3 357 aaKnown RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 CAPN12Q6ZSI9 719 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 RNF10Q8N5U6 811 aaKnown RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 RIOK1Q9BRS2 568 aaKnown RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 EPC1Q9H2F5 836 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 RAVER2Q9HCJ3 691 aaKnown RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 TBC1D22BQ9NU19 505 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 SSX2IPQ9Y2D8 614 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 WDR64B1ANS9 1081 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 CCDC188H7C350 402 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 IPO5O00410 1097 aaKnown RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 TFAMQ00059 246 aaKnown RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 SGO2Q562F6 1265 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 TTC19Q6DKK2 380 aaPredicted RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 RHOT2Q8IXI1 618 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 HACE1Q8IYU2 909 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 TC2NQ8N9U0 490 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 PRPF38AQ8NAV1 312 aaKnown RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 BANK1Q8NDB2 785 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 WHAMMQ8TF30 809 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 C7orf25Q9BPX7 421 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 AP1M1Q9BXS5 423 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 ZMYND12Q9H0C1 365 aa9.31□□□□□ -0.92
TMCO1-208ENST00000612311 ATF5Q9Y2D1 282 aaPredicted RBP9.31□□□□□ -0.92
TMCO1-208ENST00000612311 DCCP43146 1447 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 PABPN1LA6NDY0 278 aaKnown RBP9.3□□□□□ -0.92
TMCO1-208ENST00000612311 JAK3P52333 1124 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 LMNB2Q03252 620 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 STRIP1Q5VSL9 837 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 MRPL47Q9HD33 250 aaKnown RBP9.3□□□□□ -0.92
TMCO1-208ENST00000612311 PIM2Q9P1W9 311 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 MRFAP1Q9Y605 127 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 ABCB11O95342 1321 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.3□□□□□ -0.92
TMCO1-208ENST00000612311 NDUFB10O96000 172 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 GCLMP48507 274 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 TAF12Q16514 161 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 SLC10A5Q5PT55 438 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 CCDC13Q8IYE1 715 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 ELOA2Q8IYF1 753 aaPredicted RBP9.3□□□□□ -0.92
TMCO1-208ENST00000612311 MCPH1Q8NEM0 835 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 TADA3O75528 432 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 ECEL1O95672 775 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 P4HBP07237 508 aaKnown RBP9.3□□□□□ -0.92
TMCO1-208ENST00000612311 PHBP35232 272 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 SPP2Q13103 211 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 PPP2R5DQ14738 602 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 BSPRYQ5W0U4 402 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 ALS2CLQ60I27 953 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 CDC42EP5Q6NZY7 148 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 EIF2AK1Q9BQI3 630 aaKnown RBP9.3□□□□□ -0.92
TMCO1-208ENST00000612311 NFU1Q9UMS0 254 aa9.3□□□□□ -0.92
TMCO1-208ENST00000612311 QARSP47897 775 aaKnown RBP9.29□□□□□ -0.92
TMCO1-208ENST00000612311 CCNA1P78396 465 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 KRT76Q01546 638 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 SNX1Q13596 522 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 NTRK3Q16288 839 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 PPP1R2P3Q6NXS1 205 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 SPATS2Q86XZ4 545 aaKnown RBP9.29□□□□□ -0.92
TMCO1-208ENST00000612311 RNF146Q9NTX7 359 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 NYAP2Q9P242 653 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 HDAC6Q9UBN7 1215 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 HPSEQ9Y251 543 aa9.29□□□□□ -0.92
TMCO1-208ENST00000612311 ITIH6Q6UXX5 1313 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms