RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 WRNIP1Q96S55 665 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 RNF181Q9P0P0 153 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 MYO1AQ9UBC5 1043 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 SEL1LQ9UBV2 794 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 CLIC4Q9Y696 253 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 WDR64B1ANS9 1081 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 SLC10A5Q5PT55 438 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 GRK7Q8WTQ7 553 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 DPF2Q92785 391 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 COA7Q96BR5 231 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 GJB4Q9NTQ9 266 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 NR2F2P24468 414 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 INPP5BP32019 993 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 USP11P51784 963 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 RNASE9P60153 205 aaKnown RBP7.27□□□□□ -1.25
PBX1-221ENST00000612123 FAM186BQ8IYM0 893 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 TDRD7Q8NHU6 1098 aaKnown RBP7.27□□□□□ -1.25
PBX1-221ENST00000612123 KDM4CQ9H3R0 1056 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 NLRC4Q9NPP4 1024 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 DDX20Q9UHI6 824 aaKnown RBP7.27□□□□□ -1.25
PBX1-221ENST00000612123 KDM6AO15550 1401 aaPredicted RBP7.27□□□□□ -1.25
PBX1-221ENST00000612123 PVALEFA0A1B0GWK0 134 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 INO80B-WBP1J3KQ70 363 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 ZRANB2O95218 330 aaKnown RBP eCLIP7.27□□□□□ -1.25
PBX1-221ENST00000612123 ZBTB7AO95365 584 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 SMARCA1P28370 1054 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 SLC16A2P36021 539 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 IFT88Q13099 833 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 ARHGAP44Q17R89 818 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 WHAMMP3Q1A5X7 153 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 C10orf76Q5T2E6 689 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 C12orf60Q5U649 245 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 METTL23Q86XA0 190 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 MB21D2Q8IYB1 491 aaPredicted RBP7.27□□□□□ -1.25
PBX1-221ENST00000612123 TTC39CQ8N584 583 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 TMCO5AQ8N6Q1 288 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 BBOF1Q8ND07 529 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 SPATA17Q96L03 361 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 MAP3K14Q99558 947 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 TUBGCP2Q9BSJ2 902 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 ABT1Q9ULW3 272 aaKnown RBP7.27□□□□□ -1.25
PBX1-221ENST00000612123 TMA7Q9Y2S6 64 aaKnown RBP7.27□□□□□ -1.25
PBX1-221ENST00000612123 ZHX2Q9Y6X8 837 aa7.27□□□□□ -1.25
PBX1-221ENST00000612123 GSG1L2A8MUP6 293 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 USP17L15C9J2P7 530 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 USP17L13C9JLJ4 530 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 USP17L11C9JVI0 530 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 USP17L18D6R9N7 530 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 USP17L22D6RA61 530 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 USP17L17D6RBQ6 530 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 USP17L19D6RCP7 530 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 USP17L20D6RJB6 530 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 F5H6K3 240 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 RNF40O75150 1001 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 NSFP46459 744 aaKnown RBP7.26□□□□□ -1.25
PBX1-221ENST00000612123 KLRC3Q07444 240 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 USP17L24Q0WX57 530 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 MYO1EQ12965 1108 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 ATG9AQ7Z3C6 839 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 SRGAP1Q7Z6B7 1085 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 DEFB132Q7Z7B7 95 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 RDH13Q8NBN7 331 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 CEP63Q96MT8 703 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 SPZ1Q9BXG8 430 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 SLC39A2Q9NP94 309 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 PRKAG2Q9UGJ0 569 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 LAMA3Q16787 3333 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 CEP104O60308 925 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 NTSR2O95665 410 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 ERCC3P19447 782 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 MAN1A1P33908 653 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 ARL1P40616 181 aaPredicted RBP7.26□□□□□ -1.25
PBX1-221ENST00000612123 COPB1P53618 953 aaKnown RBP7.26□□□□□ -1.25
PBX1-221ENST00000612123 VSNL1P62760 191 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 LMNB2Q03252 620 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 TRMT44Q8IYL2 757 aaKnown RBP7.26□□□□□ -1.25
PBX1-221ENST00000612123 AGBL3Q8NEM8 1001 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 NYAP2Q9P242 653 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 CAPN9O14815 690 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 AFPP02771 609 aaKnown RBP7.26□□□□□ -1.25
PBX1-221ENST00000612123 RESTQ13127 1097 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 TOGARAM2Q6ZUX3 1019 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 PPM1KQ8N3J5 372 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 NSUN4Q96CB9 384 aaKnown RBP7.26□□□□□ -1.25
PBX1-221ENST00000612123 SMC6Q96SB8 1091 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 ETAA1Q9NY74 926 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 RWDD2AQ9UIY3 292 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 VCANP13611 3396 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 COL3A1P02461 1466 aaPredicted RBP7.26□□□□□ -1.25
PBX1-221ENST00000612123 NPHP3-ACAD11A0A0J9YXS1 232 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 ASB14A6NK59 587 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 PLA2G4BP0C869 781 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 GSCP56915 257 aaPredicted RBP7.26□□□□□ -1.25
PBX1-221ENST00000612123 CDC42EP1Q00587 391 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 TBC1D25Q3MII6 688 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 PROM2Q8N271 834 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 RAB3IL1Q8TBN0 382 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 IFT81Q8WYA0 676 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 GJA10Q969M2 543 aa7.26□□□□□ -1.25
PBX1-221ENST00000612123 RMDN3Q96TC7 470 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms