RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 ARHGAP20Q9P2F6 1191 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 SEC63Q9UGP8 760 aaKnown RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 DMGDHQ9UI17 866 aaKnown RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 DICER1Q9UPY3 1922 aaKnown RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 MYMKA6NI61 221 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 PSMD14O00487 310 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 TPPPO94811 219 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 KRT83P78385 493 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 DEUP1Q05D60 604 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 GFPT1Q06210 699 aaPredicted RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 SPA17Q15506 151 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 C16orf86Q6ZW13 317 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 MS4A14Q96JA4 679 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 FAM81BQ96LP2 452 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 CCSER1Q9C0I3 900 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 ZMYND12Q9H0C1 365 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 N6AMT1Q9Y5N5 214 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 A0A087WUV0 522 aaPredicted RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 GPR75-ASB3A0A0A6YYF3 556 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 LRRC53A6NM62 1247 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 HOXA10P31260 410 aaPredicted RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 PDE6BP35913 854 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 SLC16A2P36021 539 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 GALNT17Q6IS24 598 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 C15orf52Q6ZUT6 534 aaKnown RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 ARMC9Q7Z3E5 817 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 NEK8Q86SG6 692 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 LRRC1Q9BTT6 524 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 TTYH3Q9C0H2 523 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 MMADHCQ9H3L0 296 aaPredicted RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 SALL4Q9UJQ4 1053 aa11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 PACSIN2Q9UNF0 486 aaPredicted RBP11.73□□□□□ -0.53
PCDHGC3-202ENST00000611950 ESYT3A0FGR9 886 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 KRT38O76015 456 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 SYF2O95926 243 aaKnown RBP11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 LDHCP07864 332 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 KCNA2P16389 499 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 NT5C2P49902 561 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 SFSWAPQ12872 951 aaKnown RBP11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 SND1Q7KZF4 910 aaKnown RBP eCLIP11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 KIAA0825Q8IV33 1275 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 REXO1Q8N1G1 1221 aaKnown RBP11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 SELENOOQ9BVL4 669 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 SPZ1Q9BXG8 430 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 FER1L6Q2WGJ9 1857 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 ZSCAN5CA6NGD5 496 aaPredicted RBP11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 CREB3O43889 395 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 POTEIP0CG38 1075 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 VDRP11473 427 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 BDNFP23560 247 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 NF2P35240 595 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 RANBP1P43487 201 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 KIF11P52732 1056 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 KCNB1Q14721 858 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 NEDD1Q8NHV4 660 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 SNX29Q8TEQ0 813 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 RPGRQ92834 1020 aaKnown RBP11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 CCDC47Q96A33 483 aaKnown RBP11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 CALML4Q96GE6 196 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 FGFBP2Q9BYJ0 223 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 TSGA10Q9BZW7 698 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 GBP3Q9H0R5 595 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 MYO1AQ9UBC5 1043 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 HPCAL4Q9UM19 191 aa11.72□□□□□ -0.53
PCDHGC3-202ENST00000611950 COL11A2P13942 1736 aaPredicted RBP11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 NPHP3-ACAD11A0A0J9YXS1 232 aa11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 A0A1W2PQC6 194 aa11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 DDNO94850 711 aaPredicted RBP11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 PTK7Q13308 1070 aa11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 MPP3Q13368 585 aa11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 CALCRLQ16602 461 aa11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 CACNA2D4Q7Z3S7 1137 aa11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 PARP9Q8IXQ6 854 aa11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 TRIM11Q96F44 468 aa11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 TAOK3Q9H2K8 898 aa11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 NDST4Q9H3R1 872 aa11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 C6orf50Q9HD87 102 aa11.71□□□□□ -0.53
PCDHGC3-202ENST00000611950 SLX4Q8IY92 1834 aa11.71□□□□□ -0.54
PCDHGC3-202ENST00000611950 IL1R1P14778 569 aa11.71□□□□□ -0.54
PCDHGC3-202ENST00000611950 GRB10Q13322 594 aa11.71□□□□□ -0.54
PCDHGC3-202ENST00000611950 MKRN4PQ13434 485 aaPredicted RBP11.71□□□□□ -0.54
PCDHGC3-202ENST00000611950 CRY2Q49AN0 593 aa11.71□□□□□ -0.54
PCDHGC3-202ENST00000611950 MFSD14BQ5SR56 506 aa11.71□□□□□ -0.54
PCDHGC3-202ENST00000611950 SV2BQ7L1I2 683 aa11.71□□□□□ -0.54
PCDHGC3-202ENST00000611950 MYOCDQ8IZQ8 938 aa11.71□□□□□ -0.54
PCDHGC3-202ENST00000611950 FAM117AQ9C073 453 aa11.71□□□□□ -0.54
PCDHGC3-202ENST00000611950 GOLPH3Q9H4A6 298 aa11.71□□□□□ -0.54
PCDHGC3-202ENST00000611950 POLLQ9UGP5 575 aa11.71□□□□□ -0.54
PCDHGC3-202ENST00000611950 MYH1P12882 1939 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 LAD1O00515 517 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 RIMBP2O15034 1052 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 TAL1P17542 331 aaPredicted RBP11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 CA8P35219 290 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 COPB2P35606 906 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 MCCD1P59942 119 aaPredicted RBP11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 LAMB3Q13751 1172 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 ECM1Q16610 540 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 TTBK2Q6IQ55 1244 aa11.7□□□□□ -0.54
PCDHGC3-202ENST00000611950 CHADLQ6NUI6 762 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms