RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 IMPG2Q9BZV3 1241 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 PSD3Q9NYI0 1048 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 SAMD15Q9P1V8 674 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 ATP8A1Q9Y2Q0 1164 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 CAPN7Q9Y6W3 813 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 TESPA1A2RU30 521 aaPredicted RBP9.45□□□□□ -0.9
LIG4-204ENST00000611712 SLC9A1P19634 815 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 GIMAP7Q8NHV1 300 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 ZNF507Q8TCN5 953 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 MAGOHBQ96A72 148 aaKnown RBP9.45□□□□□ -0.9
LIG4-204ENST00000611712 FAM212AQ96EL1 285 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 PNMA5Q96PV4 448 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 DDX47Q9H0S4 455 aaKnown RBP9.45□□□□□ -0.9
LIG4-204ENST00000611712 UBE2TQ9NPD8 197 aaPredicted RBP9.45□□□□□ -0.9
LIG4-204ENST00000611712 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.45□□□□□ -0.9
LIG4-204ENST00000611712 DAAM1Q9Y4D1 1078 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 FGGP02679 453 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 CLUL1Q15846 466 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 WDR78Q5VTH9 848 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 WDR59Q6PJI9 974 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 CNKSR1Q969H4 720 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 MASTLQ96GX5 879 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 DYDC2Q96IM9 177 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 IWS1Q96ST2 819 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 EIF2AK1Q9BQI3 630 aaKnown RBP9.45□□□□□ -0.9
LIG4-204ENST00000611712 REEP2Q9BRK0 252 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 BLOC1S4Q9NUP1 217 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 DMGDHQ9UI17 866 aaKnown RBP9.45□□□□□ -0.9
LIG4-204ENST00000611712 PLAAQ9Y263 795 aa9.45□□□□□ -0.9
LIG4-204ENST00000611712 RGS16O15492 202 aaPredicted RBP9.44□□□□□ -0.9
LIG4-204ENST00000611712 UCHL3P15374 230 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 PLTPP55058 493 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 CDK17Q00537 523 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 MEA1Q16626 185 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 FRMD5Q7Z6J6 570 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 MMGT1Q8N4V1 131 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 JDP2Q8WYK2 163 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 HOOK2Q96ED9 719 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 DLATP10515 647 aaKnown RBP9.44□□□□□ -0.9
LIG4-204ENST00000611712 EZH2Q15910 746 aaKnown RBP9.44□□□□□ -0.9
LIG4-204ENST00000611712 MIGA2Q7L4E1 593 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 CEP57Q86XR8 500 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 IFT74Q96LB3 600 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 FAM114A2Q9NRY5 505 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 A0A087X0T9 212 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 CCDC188H7C350 402 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 PDXKO00764 312 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 ADAMTS3O15072 1205 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 NDUFB10O96000 172 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 FAM228BP0C875 321 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 CYP11B2P19099 503 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 NMT1P30419 496 aaKnown RBP9.44□□□□□ -0.9
LIG4-204ENST00000611712 NFIAQ12857 509 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 EDRF1Q3B7T1 1238 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 ZNF365Q70YC5 407 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 APTXQ7Z2E3 356 aaKnown RBP9.44□□□□□ -0.9
LIG4-204ENST00000611712 GLYCTKQ8IVS8 523 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 GJD4Q96KN9 370 aaPredicted RBP9.44□□□□□ -0.9
LIG4-204ENST00000611712 GOLPH3Q9H4A6 298 aa9.44□□□□□ -0.9
LIG4-204ENST00000611712 MAP2K7O14733 419 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 RAD17O75943 681 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 TRIM49P0CI25 452 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 TRIM49CP0CI26 452 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 MYBP10242 640 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 CUL1Q13616 776 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 DRAP1Q14919 205 aaPredicted RBP9.43□□□□□ -0.9
LIG4-204ENST00000611712 KRT27Q7Z3Y8 459 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 KCNK18Q7Z418 384 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 NLRX1Q86UT6 975 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 EFCAB13Q8IY85 973 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 FLAD1Q8NFF5 587 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 REXO2Q9Y3B8 237 aaKnown RBP9.43□□□□□ -0.9
LIG4-204ENST00000611712 GRID2IPA4D2P6 1211 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 CARSP49589 748 aaKnown RBP9.43□□□□□ -0.9
LIG4-204ENST00000611712 VPS41P49754 854 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 IFT88Q13099 833 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 SH2D3CQ8N5H7 860 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 GPATCH11Q8N954 259 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 IPO4Q8TEX9 1081 aaKnown RBP9.43□□□□□ -0.9
LIG4-204ENST00000611712 SHISA4Q96DD7 197 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 USTQ9Y2C2 406 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 ABCB11O95342 1321 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 A0A087WUV0 522 aaPredicted RBP9.43□□□□□ -0.9
LIG4-204ENST00000611712 ANKRD62A6NC57 917 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 RCCD1A6NED2 376 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 TRIM66O15016 1216 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 ECE2O60344 883 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 ZBED4O75132 1171 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 IL1R1P14778 569 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 IRX5P78411 483 aaPredicted RBP9.43□□□□□ -0.9
LIG4-204ENST00000611712 PTK2Q05397 1052 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 NAB2Q15742 525 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 SRLQ86TD4 932 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 CATSPER3Q86XQ3 398 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 PLCB1Q9NQ66 1216 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 NYAP2Q9P242 653 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 NOVA2Q9UNW9 492 aaKnown RBP9.43□□□□□ -0.9
LIG4-204ENST00000611712 PTPN22Q9Y2R2 807 aa9.43□□□□□ -0.9
LIG4-204ENST00000611712 MED24O75448 989 aa9.42□□□□□ -0.9
LIG4-204ENST00000611712 EYA4O95677 639 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms