RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 RASA3Q14644 834 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 PRPF38AQ8NAV1 312 aaKnown RBP13.11□□□□□ -0.31
SRRT-213ENST00000611405 PIGOQ8TEQ8 1089 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 JDP2Q8WYK2 163 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 LPAR1Q92633 364 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 RIT2Q99578 217 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 MXRA8Q9BRK3 442 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 SEL1LQ9UBV2 794 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 JRKLQ9Y4A0 524 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 ERLIN1O75477 346 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 TBC1D8O95759 1140 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 TFRCP02786 760 aaKnown RBP13.11□□□□□ -0.31
SRRT-213ENST00000611405 ARP10275 920 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 TNFAIP1Q13829 316 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 NFIL3Q16649 462 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 B3GNT9Q6UX72 402 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 MCF2L2Q86YR7 1114 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 NEK9Q8TD19 979 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 CRACR2AQ9BSW2 395 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 GANQ9H2C0 597 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 UNC45AQ9H3U1 944 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 LUC7LQ9NQ29 371 aaKnown RBP13.11□□□□□ -0.31
SRRT-213ENST00000611405 PLCB1Q9NQ66 1216 aa13.11□□□□□ -0.31
SRRT-213ENST00000611405 ASTN1O14525 1302 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 UBE4BO95155 1302 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 EPB41P11171 864 aaKnown RBP13.1□□□□□ -0.31
SRRT-213ENST00000611405 BCRP11274 1271 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 PLA2G4AP47712 749 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 ZNF280AP59817 542 aaPredicted RBP13.1□□□□□ -0.31
SRRT-213ENST00000611405 TDRD12Q587J7 1177 aaKnown RBP13.1□□□□□ -0.31
SRRT-213ENST00000611405 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 MYCT1Q8N699 235 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 AGBL1Q96MI9 1066 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 ALS2CR12Q96Q35 445 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 GBP3Q9H0R5 595 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 PARVGQ9HBI0 331 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 PRDM10Q9NQV6 1147 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 AIPL1Q9NZN9 384 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 SMCHD1A6NHR9 2005 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 ZNF536O15090 1300 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 FRMPD4Q14CM0 1322 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 RPTORQ8N122 1335 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
SRRT-213ENST00000611405 GHRHRQ02643 423 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 DALRD3Q5D0E6 543 aaKnown RBP13.1□□□□□ -0.31
SRRT-213ENST00000611405 STXBP4Q6ZWJ1 553 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 KIAA1683Q9H0B3 1180 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 TAOK3Q9H2K8 898 aa13.1□□□□□ -0.31
SRRT-213ENST00000611405 IPO5O00410 1097 aaKnown RBP13.09□□□□□ -0.31
SRRT-213ENST00000611405 TLR2O60603 784 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 PRLRP16471 622 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 ASIC2Q16515 512 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 LONRF2Q1L5Z9 754 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 DEFB132Q7Z7B7 95 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 RNF10Q8N5U6 811 aaKnown RBP13.09□□□□□ -0.31
SRRT-213ENST00000611405 SAMD3Q8N6K7 520 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 HOOK2Q96ED9 719 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 PNKPQ96T60 521 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 ODF2LQ9ULJ1 636 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 SHTN1A0MZ66 631 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 AKAP3O75969 853 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 RHOXF2BP0C7M4 288 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 RPS12P25398 132 aaKnown RBP13.09□□□□□ -0.31
SRRT-213ENST00000611405 ZNF131P52739 623 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 GFPT1Q06210 699 aaPredicted RBP13.09□□□□□ -0.31
SRRT-213ENST00000611405 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 NOA1Q8NC60 698 aaKnown RBP13.09□□□□□ -0.31
SRRT-213ENST00000611405 CLEC4DQ8WXI8 215 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 RHOXF2Q9BQY4 288 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 MLXIPQ9HAP2 919 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 MAP3K20Q9NYL2 800 aaKnown RBP13.09□□□□□ -0.31
SRRT-213ENST00000611405 ATAD5Q96QE3 1844 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 SRGAP2O75044 1071 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 MOCS3O95396 460 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 RAPGEF1Q13905 1077 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 IQCEQ6IPM2 695 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 TEPSINQ96N21 525 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 MMS19Q96T76 1030 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 FUT8Q9BYC5 575 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 JADE2Q9NQC1 790 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 PNMA2Q9UL42 364 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 SNX12Q9UMY4 172 aa13.09□□□□□ -0.31
SRRT-213ENST00000611405 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 CTNND1O60716 968 aaKnown RBP13.08□□□□□ -0.32
SRRT-213ENST00000611405 GUCY2CP25092 1073 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 DMTNQ08495 405 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 EXOC3L4Q17RC7 722 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 UTP14CQ5TAP6 766 aaKnown RBP13.08□□□□□ -0.32
SRRT-213ENST00000611405 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.08□□□□□ -0.32
SRRT-213ENST00000611405 CAPN6Q9Y6Q1 641 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 TGFB1I1O43294 461 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 SASH3O75995 380 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 ITGB5P18084 799 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 MCM3P25205 808 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 NMT1P30419 496 aaKnown RBP13.08□□□□□ -0.32
SRRT-213ENST00000611405 USP14P54578 494 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 RASSF7Q02833 373 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 KLHL30Q0D2K2 578 aa13.08□□□□□ -0.32
SRRT-213ENST00000611405 BEND6Q5SZJ8 279 aaPredicted RBP13.08□□□□□ -0.32
SRRT-213ENST00000611405 KLHDC7AQ5VTJ3 777 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms