RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 PDCL3Q9H2J4 239 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 FBXO40Q9UH90 709 aa13.65□□□□□ -0.22
TP53-219ENST00000610538 WDR64B1ANS9 1081 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 B4DLN1 442 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 FAM13AO94988 1023 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 GCNT3O95395 438 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 NMT1P30419 496 aaKnown RBP13.64□□□□□ -0.23
TP53-219ENST00000610538 YWHABP31946 246 aaKnown RBP13.64□□□□□ -0.23
TP53-219ENST00000610538 ERVK-9P63128 1117 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 ERVK-24P63145 666 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 ANKRD20A12PQ8NF67 263 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 KIAA1524Q8TCG1 905 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 GPRASP2Q96D09 838 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 CNOT6LQ96LI5 555 aaKnown RBP13.64□□□□□ -0.23
TP53-219ENST00000610538 CTAGE1Q96RT6 745 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 TUBGCP2Q9BSJ2 902 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 IMPACTQ9P2X3 320 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 GABBR1Q9UBS5 961 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 LIMA1Q9UHB6 759 aaKnown RBP13.64□□□□□ -0.23
TP53-219ENST00000610538 PAPPA2Q9BXP8 1791 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 LRRC10BA6NIK2 292 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 USO1O60763 962 aaKnown RBP13.64□□□□□ -0.23
TP53-219ENST00000610538 EIF3JO75822 258 aaKnown RBP13.64□□□□□ -0.23
TP53-219ENST00000610538 MTIF2P46199 727 aaKnown RBP13.64□□□□□ -0.23
TP53-219ENST00000610538 HUNKP57058 714 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 PADI6Q6TGC4 694 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 PTPN18Q99952 460 aa13.64□□□□□ -0.23
TP53-219ENST00000610538 JPH1Q9HDC5 661 aaPredicted RBP13.64□□□□□ -0.23
TP53-219ENST00000610538 KIAA1217Q5T5P2 1943 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 PFASO15067 1338 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 FRMD3A2A2Y4 597 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 CCZ1BP86790 482 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 CCZ1P86791 482 aaPredicted RBP13.63□□□□□ -0.23
TP53-219ENST00000610538 KCTD2Q14681 263 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 NOLC1Q14978 699 aaKnown RBP eCLIP13.63□□□□□ -0.23
TP53-219ENST00000610538 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 XRRA1Q6P2D8 792 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 DNERQ8NFT8 737 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 CCDC43Q96MW1 224 aaKnown RBP13.63□□□□□ -0.23
TP53-219ENST00000610538 THAP9Q9H5L6 903 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 GPRC5CQ9NQ84 441 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 PCDHA10Q9Y5I2 948 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 COL4A3BPQ9Y5P4 624 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 SPATA31C2B4DYI2 1134 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 SLC26A4O43511 780 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 CETPP11597 493 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 HOXD13P35453 343 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 RARRES1P49788 294 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 SOX10P56693 466 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 GSDMDP57764 484 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 KRT76Q01546 638 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 LY6KQ17RY6 165 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 TMEM63BQ5T3F8 832 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 FAM133AQ8N9E0 248 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 MMP19Q99542 508 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 TRMT1Q9NXH9 659 aaKnown RBP13.63□□□□□ -0.23
TP53-219ENST00000610538 SLC9A2Q9UBY0 812 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 DOCK5Q9H7D0 1870 aa13.63□□□□□ -0.23
TP53-219ENST00000610538 BACH1O14867 736 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 ZNF862O60290 1169 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 HIP1RO75146 1068 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 GTF2A2P52657 109 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 ACTR2P61160 394 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 RBL2Q08999 1139 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 XKR9Q5GH70 373 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 ODR4Q5SWX8 454 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 IWS1Q96ST2 819 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 PARVGQ9HBI0 331 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 RNF225M0QZC1 329 aaPredicted RBP13.62□□□□□ -0.23
TP53-219ENST00000610538 CLIC2O15247 247 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 MAFGO15525 162 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 SLC25A27O95847 323 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 ITGBL1O95965 494 aaPredicted RBP13.62□□□□□ -0.23
TP53-219ENST00000610538 KLK7P49862 253 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 PSMC5P62195 406 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 SPAG1Q07617 926 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 SPRYD7Q5W111 196 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 ANO5Q75V66 913 aa13.62□□□□□ -0.23
TP53-219ENST00000610538 CCDC60Q8IWA6 550 aaPredicted RBP13.62□□□□□ -0.23
TP53-219ENST00000610538 NOC4LQ9BVI4 516 aaKnown RBP13.62□□□□□ -0.23
TP53-219ENST00000610538 R3HCC1Q9Y3T6 440 aaKnown RBP13.62□□□□□ -0.23
TP53-219ENST00000610538 USP27XA6NNY8 438 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 DAW1Q8N136 415 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 CCDC155Q8N6L0 562 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 GPRC5AQ8NFJ5 357 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 KCTD10Q9H3F6 313 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 EEF1GP26641 437 aaKnown RBP13.61□□□□□ -0.23
TP53-219ENST00000610538 CASP14P31944 242 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 PPP1R2P41236 205 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 JAK3P52333 1124 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 GRM1Q13255 1194 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 COBLL1Q53SF7 1204 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 DNTTIP2Q5QJE6 756 aaKnown RBP13.61□□□□□ -0.23
TP53-219ENST00000610538 FBXO16Q8IX29 292 aaPredicted RBP13.61□□□□□ -0.23
TP53-219ENST00000610538 FAM178BQ8IXR5 827 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 FGD4Q96M96 766 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 TSG101Q99816 390 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 PNMA3Q9UL41 463 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 HTTP42858 3142 aa13.61□□□□□ -0.23
TP53-219ENST00000610538 SFNP31947 248 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms