RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ARSHQ5FYA8 562 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 CPLX4Q7Z7G2 160 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 BHMT2Q9H2M3 363 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 PCDHAC2Q9Y5I4 1007 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 CASZ1Q86V15 1759 aa22.29■■□□□ 1.16
SSBP3-216ENST00000610401 ZNF844Q08AG5 666 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 ZCWPW2Q504Y3 356 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 KDM7AQ6ZMT4 941 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 CYFIP2Q96F07 1278 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 SH2D3AQ9BRG2 576 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 SKOR1P84550 965 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 COG2Q14746 738 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 CCDC121Q6ZUS5 278 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 SPATA31A1Q5TZJ5 1347 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 ADCY1Q08828 1119 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 CCDC38Q502W7 563 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 TAX1BP1Q86VP1 789 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 CCDC13Q8IYE1 715 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 SPICE1Q8N0Z3 855 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 REEP2Q9BRK0 252 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 PKD2L1Q9P0L9 805 aa22.28■■□□□ 1.16
SSBP3-216ENST00000610401 ZNF219Q9P2Y4 722 aaPredicted RBP22.28■■□□□ 1.16
SSBP3-216ENST00000610401 CCNL1Q9UK58 526 aaPredicted RBP22.28■■□□□ 1.16
SSBP3-216ENST00000610401 OPLAHO14841 1288 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 TRIM49P0CI25 452 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 TRIM49CP0CI26 452 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 CYP2J2P51589 502 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 PLTPP55058 493 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 SETQ01105 290 aaPredicted RBP22.27■■□□□ 1.16
SSBP3-216ENST00000610401 CCDC25Q86WR0 208 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 CNBD1Q8NA66 436 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 MLXIPLQ9NP71 852 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.27■■□□□ 1.16
SSBP3-216ENST00000610401 EPB41P11171 864 aaKnown RBP22.27■■□□□ 1.16
SSBP3-216ENST00000610401 PON1P27169 355 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 IRF2BP2Q7Z5L9 587 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 RIOX1Q9H6W3 641 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 HAUS2Q9NVX0 235 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 TSKSQ9UJT2 592 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 PNMA2Q9UL42 364 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 PCDHGC5Q9Y5F6 944 aa22.27■■□□□ 1.16
SSBP3-216ENST00000610401 PGRMC1O00264 195 aaKnown RBP22.26■■□□□ 1.15
SSBP3-216ENST00000610401 RHBDL3P58872 404 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 GLE1Q53GS7 698 aaKnown RBP22.26■■□□□ 1.15
SSBP3-216ENST00000610401 ZNF746Q6NUN9 644 aaPredicted RBP22.26■■□□□ 1.15
SSBP3-216ENST00000610401 CATSPER3Q86XQ3 398 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 GANQ9H2C0 597 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 DNAJC17Q9NVM6 304 aaKnown RBP22.26■■□□□ 1.15
SSBP3-216ENST00000610401 SNX24Q9Y343 169 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 SNED1Q8TER0 1413 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 SHBGP04278 402 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 MRPL12P52815 198 aaKnown RBP22.26■■□□□ 1.15
SSBP3-216ENST00000610401 TMEM119Q4V9L6 283 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 MGARPQ8TDB4 240 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 NARFQ9UHQ1 456 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 PTPN22Q9Y2R2 807 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 NMT1P30419 496 aaKnown RBP22.26■■□□□ 1.15
SSBP3-216ENST00000610401 ITIH3Q06033 890 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 CTTNQ14247 550 aaKnown RBP22.26■■□□□ 1.15
SSBP3-216ENST00000610401 ZFPM1Q8IX07 1006 aa22.26■■□□□ 1.15
SSBP3-216ENST00000610401 SPDYE3A6NKU9 549 aa22.25■■□□□ 1.15
SSBP3-216ENST00000610401 FOXO6A8MYZ6 492 aa22.25■■□□□ 1.15
SSBP3-216ENST00000610401 RBM5P52756 815 aaKnown RBP eCLIP22.25■■□□□ 1.15
SSBP3-216ENST00000610401 ZNF572Q7Z3I7 529 aaPredicted RBP22.25■■□□□ 1.15
SSBP3-216ENST00000610401 WHAMMQ8TF30 809 aa22.25■■□□□ 1.15
SSBP3-216ENST00000610401 TBC1D31Q96DN5 1066 aa22.25■■□□□ 1.15
SSBP3-216ENST00000610401 KCTD10Q9H3F6 313 aa22.25■■□□□ 1.15
SSBP3-216ENST00000610401 TMBIM4Q9HC24 238 aa22.25■■□□□ 1.15
SSBP3-216ENST00000610401 TAS2R14Q9NYV8 317 aa22.25■■□□□ 1.15
SSBP3-216ENST00000610401 DDX20Q9UHI6 824 aaKnown RBP22.25■■□□□ 1.15
SSBP3-216ENST00000610401 AFPP02771 609 aaKnown RBP22.25■■□□□ 1.15
SSBP3-216ENST00000610401 ECHS1P30084 290 aa22.25■■□□□ 1.15
SSBP3-216ENST00000610401 PDIA5Q14554 519 aa22.25■■□□□ 1.15
SSBP3-216ENST00000610401 PNMA6FA0A0J9YX94 578 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 H2AFZP0C0S5 128 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 GALCP54803 685 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 H2AFVQ71UI9 128 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 PALB2Q86YC2 1186 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 TPCN2Q8NHX9 752 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 PPP1R9AQ9ULJ8 1098 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 ARAP2Q8WZ64 1704 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 ZNF76P36508 570 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 CDR1P51861 262 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 NFIAQ12857 509 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 USP11P51784 963 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 QRICH1Q2TAL8 776 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 SLC10A5Q5PT55 438 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 RAPGEF5Q92565 580 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 ISCUQ9H1K1 167 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 DHX36Q9H2U1 1008 aaKnown RBP22.24■■□□□ 1.15
SSBP3-216ENST00000610401 ACP6Q9NPH0 428 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 USP40Q9NVE5 1235 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 DAGLAQ9Y4D2 1042 aa22.24■■□□□ 1.15
SSBP3-216ENST00000610401 GMNCA6NCL1 334 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 CAND2O75155 1236 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 PSMD2Q13200 908 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 GRAPQ13588 217 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 OTUD6AQ7L8S5 288 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 TPH2Q8IWU9 490 aa22.23■■□□□ 1.15
SSBP3-216ENST00000610401 PROM2Q8N271 834 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms