RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CHMP2AO43633 222 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 PPP1R12BO60237 982 aaPredicted RBP13.15□□□□□ -0.3
USP6NL-206ENST00000609853 LYPLA2O95372 231 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 NR3C1P04150 777 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 ALAS1P13196 640 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 ITGB5P18084 799 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 HOXD13P35453 343 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 BACE1P56817 501 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 KCNH2Q12809 1159 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 ALCAMQ13740 583 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 SLC9C1Q4G0N8 1177 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 SAMD1Q6SPF0 538 aaPredicted RBP13.15□□□□□ -0.3
USP6NL-206ENST00000609853 MYCT1Q8N699 235 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 LRRN4CLQ8ND94 238 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 SYTL5Q8TDW5 730 aaPredicted RBP13.15□□□□□ -0.3
USP6NL-206ENST00000609853 PIGOQ8TEQ8 1089 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 C12orf42Q96LP6 360 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 PURBQ96QR8 312 aaKnown RBP13.15□□□□□ -0.3
USP6NL-206ENST00000609853 MKNK1Q9BUB5 465 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 TIPINQ9BVW5 301 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 ZSWIM4Q9H7M6 989 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 KCNH7Q9NS40 1196 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 ARHGAP20Q9P2F6 1191 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 DDX41Q9UJV9 622 aaKnown RBP13.15□□□□□ -0.3
USP6NL-206ENST00000609853 DBR1Q9UK59 544 aaKnown RBP13.15□□□□□ -0.3
USP6NL-206ENST00000609853 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
USP6NL-206ENST00000609853 GOLGB1Q14789 3259 aaKnown RBP13.14□□□□□ -0.31
USP6NL-206ENST00000609853 GTPBP10A4D1E9 387 aaKnown RBP13.14□□□□□ -0.31
USP6NL-206ENST00000609853 ARHGEF35A5YM69 484 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 C19orf81C9J6K1 198 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 NFIBO00712 420 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 EPHB6O15197 1021 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 ATP8B1O43520 1251 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 AKR1B10O60218 316 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 EGFRP00533 1210 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 AFPP02771 609 aaKnown RBP13.14□□□□□ -0.31
USP6NL-206ENST00000609853 SERPING1P05155 500 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 MYBP10242 640 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 MAPTP10636 758 aaKnown RBP13.14□□□□□ -0.31
USP6NL-206ENST00000609853 XRCC5P13010 732 aaKnown RBP13.14□□□□□ -0.31
USP6NL-206ENST00000609853 KIF11P52732 1056 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 UBXN2AP68543 259 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 AMPD2Q01433 879 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 MTMR2Q13614 643 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 MYBPC2Q14324 1141 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 TKFCQ3LXA3 575 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 SFMBT2Q5VUG0 894 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 SAMD7Q7Z3H4 446 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 MIER3Q7Z3K6 550 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 ZNF280CQ8ND82 737 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 TRIM58Q8NG06 486 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 RPGRIP1Q96KN7 1286 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 LXNQ9BS40 222 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 IFIH1Q9BYX4 1025 aaKnown RBP13.14□□□□□ -0.31
USP6NL-206ENST00000609853 RPAP3Q9H6T3 665 aaPredicted RBP13.14□□□□□ -0.31
USP6NL-206ENST00000609853 AGO4Q9HCK5 861 aaKnown RBP13.14□□□□□ -0.31
USP6NL-206ENST00000609853 PICK1Q9NRD5 415 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 FBXL5Q9UKA1 691 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 ASTN1O14525 1302 aa13.14□□□□□ -0.31
USP6NL-206ENST00000609853 RSPH10B2B2RC85 870 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 RBAK-RBAKDNI3L0D1 243 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 MAFGO15525 162 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 PJA2O43164 708 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 NOL4O94818 638 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 PRPF6O94906 941 aaKnown RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 RSPH10BP0C881 870 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 EIF4A3P38919 411 aaKnown RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 ASTE1Q2TB18 679 aaPredicted RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 TBC1D10BQ4KMP7 808 aaPredicted RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 PAPD7Q5XG87 772 aaKnown RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 HS2ST1Q7LGA3 356 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 ZNF720Q7Z2F6 126 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 TRAPPC11Q7Z392 1133 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 FAM178BQ8IXR5 827 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 SMCR8Q8TEV9 937 aaPredicted RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 TMEM174Q8WUU8 243 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 SGIP1Q9BQI5 828 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 LSM14BQ9BX40 385 aaKnown RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 RAVER2Q9HCJ3 691 aaKnown RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 AIPL1Q9NZN9 384 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 COL20A1Q9P218 1284 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 PPP1R1BQ9UD71 204 aaPredicted RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 DAAM1Q9Y4D1 1078 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 PCDHA13Q9Y5I0 950 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 BZW2Q9Y6E2 419 aaKnown RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 CTAGE15A4D2H0 777 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 VWA5AO00534 786 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 DHX15O43143 795 aaKnown RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 TACC1O75410 805 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 ABL1P00519 1130 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 CTAGE8P0CG41 777 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 ANXA13P27216 316 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 SFNP31947 248 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 PSMC2P35998 433 aaKnown RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 MTMR1Q13613 665 aa13.13□□□□□ -0.31
USP6NL-206ENST00000609853 BMS1Q14692 1282 aaKnown RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 NBPF12Q5TAG4 269 aaPredicted RBP13.13□□□□□ -0.31
USP6NL-206ENST00000609853 TMCO3Q6UWJ1 677 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms