RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 C10orf71Q711Q0 1435 aa24.4■■□□□ 1.5
SHANK2-220ENST00000608988 F8VZ95 297 aa24.4■■□□□ 1.5
SHANK2-220ENST00000608988 PLA2G4BP0C869 781 aa24.4■■□□□ 1.5
SHANK2-220ENST00000608988 UCHL3P15374 230 aa24.4■■□□□ 1.5
SHANK2-220ENST00000608988 ECM1Q16610 540 aa24.4■■□□□ 1.5
SHANK2-220ENST00000608988 NBPF9Q3BBW0 867 aa24.4■■□□□ 1.5
SHANK2-220ENST00000608988 FUKQ8N0W3 1084 aa24.4■■□□□ 1.5
SHANK2-220ENST00000608988 PDHBP11177 359 aa24.39■■□□□ 1.5
SHANK2-220ENST00000608988 C15orf52Q6ZUT6 534 aaKnown RBP24.39■■□□□ 1.5
SHANK2-220ENST00000608988 MAPKAPK5Q8IW41 473 aa24.39■■□□□ 1.5
SHANK2-220ENST00000608988 HAS1Q92839 578 aa24.39■■□□□ 1.5
SHANK2-220ENST00000608988 CEP95Q96GE4 821 aa24.39■■□□□ 1.5
SHANK2-220ENST00000608988 NAP1L3Q99457 506 aaPredicted RBP24.39■■□□□ 1.5
SHANK2-220ENST00000608988 RTFDC1Q9BY42 306 aaPredicted RBP24.39■■□□□ 1.5
SHANK2-220ENST00000608988 OSBPL7Q9BZF2 842 aa24.39■■□□□ 1.5
SHANK2-220ENST00000608988 GLT8D2Q9H1C3 349 aa24.39■■□□□ 1.5
SHANK2-220ENST00000608988 NEUROG2Q9H2A3 272 aa24.39■■□□□ 1.5
SHANK2-220ENST00000608988 METTL14Q9HCE5 456 aaKnown RBP24.39■■□□□ 1.5
SHANK2-220ENST00000608988 ARMCX3Q9UH62 379 aaPredicted RBP24.39■■□□□ 1.5
SHANK2-220ENST00000608988 NOVA2Q9UNW9 492 aaKnown RBP24.39■■□□□ 1.5
SHANK2-220ENST00000608988 THRAP3Q9Y2W1 955 aaKnown RBP24.39■■□□□ 1.5
SHANK2-220ENST00000608988 CDK5RAP2Q96SN8 1893 aa24.39■■□□□ 1.49
SHANK2-220ENST00000608988 USP17L5A8MUK1 530 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 ERCC3P19447 782 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 SLC8A1P32418 973 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 HERC4Q5GLZ8 1057 aaPredicted RBP24.38■■□□□ 1.49
SHANK2-220ENST00000608988 CYB5D1Q6P9G0 228 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 GPBP1Q86WP2 473 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 HES6Q96HZ4 224 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 TXLNGYQ9BZA5 131 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 PCDHA12Q9UN75 941 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 MYH7BA7E2Y1 1941 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 SBF2Q86WG5 1849 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 PNMA6FA0A0J9YX94 578 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 SLC16A3O15427 465 aaKnown RBP24.38■■□□□ 1.49
SHANK2-220ENST00000608988 SNHG28P0DPA3 235 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 DRD4P21917 467 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 MRPL12P52815 198 aaKnown RBP24.38■■□□□ 1.49
SHANK2-220ENST00000608988 EXOC3L4Q17RC7 722 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 OR2W6PQ8NHA6 318 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 CD248Q9HCU0 757 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 POLD4Q9HCU8 107 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 DONSONQ9NYP3 566 aa24.38■■□□□ 1.49
SHANK2-220ENST00000608988 SAP30BPQ9UHR5 308 aaKnown RBP24.38■■□□□ 1.49
SHANK2-220ENST00000608988 GTPBP10A4D1E9 387 aaKnown RBP24.37■■□□□ 1.49
SHANK2-220ENST00000608988 CALUO43852 315 aaPredicted RBP24.37■■□□□ 1.49
SHANK2-220ENST00000608988 MARCH6O60337 910 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 GSTA1P08263 222 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 FERP16591 822 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 TNNI2P48788 182 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 KRT71Q3SY84 523 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 NT5DC3Q86UY8 548 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 FMNL3Q8IVF7 1028 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 NELFCDQ8IXH7 590 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 CUL5Q93034 780 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 AP1M1Q9BXS5 423 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 DDX47Q9H0S4 455 aaKnown RBP24.37■■□□□ 1.49
SHANK2-220ENST00000608988 BCCIPQ9P287 314 aaKnown RBP eCLIP24.37■■□□□ 1.492e-6■■■□□ 19.1
SHANK2-220ENST00000608988 STK24Q9Y6E0 443 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 NCANO14594 1321 aa24.37■■□□□ 1.49
SHANK2-220ENST00000608988 GPR75-ASB3A0A0A6YYF3 556 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 FAM187AA6NFU0 413 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 DAPK3O43293 454 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 NUDT17P0C025 328 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 CYP11B2P19099 503 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 NR2F2P24468 414 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 PON1P27169 355 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 SCTRP47872 440 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 JAM2P57087 298 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 MAGOHP61326 146 aaKnown RBP24.36■■□□□ 1.49
SHANK2-220ENST00000608988 DHX9Q08211 1270 aaKnown RBP24.36■■□□□ 1.49
SHANK2-220ENST00000608988 BYSLQ13895 437 aaKnown RBP24.36■■□□□ 1.49
SHANK2-220ENST00000608988 ZNF804AQ7Z570 1209 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 TXNRD3Q86VQ6 643 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 DDX42Q86XP3 938 aaKnown RBP eCLIP24.36■■□□□ 1.49
SHANK2-220ENST00000608988 MAGOHBQ96A72 148 aaKnown RBP24.36■■□□□ 1.49
SHANK2-220ENST00000608988 CHMP6Q96FZ7 201 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 FAM129AQ9BZQ8 928 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 UBA5Q9GZZ9 404 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 CNOT8Q9UFF9 292 aaKnown RBP24.36■■□□□ 1.49
SHANK2-220ENST00000608988 AMFRQ9UKV5 643 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 TULP1O00294 542 aaPredicted RBP24.36■■□□□ 1.49
SHANK2-220ENST00000608988 GBP1P32455 592 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 NF2P35240 595 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 MMP14P50281 582 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 POU5F1Q01860 360 aaKnown RBP24.36■■□□□ 1.49
SHANK2-220ENST00000608988 DDB1Q16531 1140 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 QPCTQ16769 361 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 ERMARDQ5T6L9 678 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 CPLX4Q7Z7G2 160 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 CCT6BQ92526 530 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 COA7Q96BR5 231 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 XPO6Q96QU8 1125 aaKnown RBP24.36■■□□□ 1.49
SHANK2-220ENST00000608988 DAAM1Q9Y4D1 1078 aa24.36■■□□□ 1.49
SHANK2-220ENST00000608988 DNM1LO00429 736 aa24.35■■□□□ 1.49
SHANK2-220ENST00000608988 PDXKO00764 312 aa24.35■■□□□ 1.49
SHANK2-220ENST00000608988 SSBP05455 408 aaKnown RBP eCLIP24.35■■□□□ 1.49
SHANK2-220ENST00000608988 TMOD1P28289 359 aa24.35■■□□□ 1.49
SHANK2-220ENST00000608988 EPHA7Q15375 998 aa24.35■■□□□ 1.49
SHANK2-220ENST00000608988 PGM2Q96G03 612 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms