RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 SMYD1Q8NB12 490 aa12.93□□□□□ -0.34
CTCFL-217ENST00000608425 NELFBQ8WX92 580 aa12.93□□□□□ -0.34
CTCFL-217ENST00000608425 PTPRN2Q92932 1015 aa12.93□□□□□ -0.34
CTCFL-217ENST00000608425 ATP8A2Q9NTI2 1148 aa12.93□□□□□ -0.34
CTCFL-217ENST00000608425 SWAP70Q9UH65 585 aa12.93□□□□□ -0.34
CTCFL-217ENST00000608425 ENTPD5O75356 428 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 ADAMTS2O95450 1211 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 TCP1P17987 556 aaKnown RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 VARSP26640 1264 aaKnown RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 CYLC1P35663 651 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 FKBP4Q02790 459 aaKnown RBP eCLIP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 RNF10Q8N5U6 811 aaKnown RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 ASAP3Q8TDY4 903 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 STK32AQ8WU08 396 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 APPBP2Q92624 585 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 EPSTI1Q96J88 318 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 CCDC85AQ96PX6 553 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 TMEM237Q96Q45 408 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 ADAM7Q9H2U9 754 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 NMRK1Q9NWW6 199 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 FBXO2Q9UK22 296 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 RTL9Q8NET4 1388 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 LOC102724428A0A0B4J2F2 783 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 TLDC2A0PJX2 215 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 TRIM49BA6NDI0 452 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 BOLA2-SMG1P6H3BVE0 249 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 SH2B2O14492 632 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 TMCC1O94876 653 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 ACADSP16219 412 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 GBP1P32455 592 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 IARSP41252 1262 aaKnown RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 TOB1P50616 345 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 SIK1P57059 783 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 PTPROQ16827 1216 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 CERKLQ49MI3 558 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 PARP10Q53GL7 1025 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 MARCH10Q8NA82 808 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 SMC1BQ8NDV3 1235 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 CLMNQ96JQ2 1002 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 SH2D4AQ9H788 454 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 ETNK1Q9HBU6 452 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 CNNM1Q9NRU3 951 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 ARHGEF38Q9NXL2 777 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 ANGEL1Q9UNK9 670 aaKnown RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 TRIM43BA6NCK2 446 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 A6NJR5 290 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 SNX3O60493 162 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 PDE8BO95263 885 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 CRKLP46109 303 aaKnown RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 ADCY1Q08828 1119 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 LRRC14Q15048 493 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 IRGCQ6NXR0 463 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 ZC3H18Q86VM9 953 aaKnown RBP12.92□□□□□ -0.34
CTCFL-217ENST00000608425 OSBP2Q969R2 916 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 MTMR8Q96EF0 704 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 HIC2Q96JB3 615 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 RMDN2Q96LZ7 410 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 FGFR1OP2Q9NVK5 253 aa12.92□□□□□ -0.34
CTCFL-217ENST00000608425 LSM1O15116 133 aaKnown RBP12.91□□□□□ -0.34
CTCFL-217ENST00000608425 NDUFB5O43674 189 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 IFI35P80217 286 aaPredicted RBP12.91□□□□□ -0.34
CTCFL-217ENST00000608425 AGBL2Q5U5Z8 902 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 RRAGBQ5VZM2 374 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 CACNA2D4Q7Z3S7 1137 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 APLFQ8IW19 511 aaPredicted RBP12.91□□□□□ -0.34
CTCFL-217ENST00000608425 MB21D1Q8N884 522 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 ANKLE1Q8NAG6 615 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 CSRNP2Q9H175 543 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 CYP39A1Q9NYL5 469 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 ZNF180Q9UJW8 692 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 DENND2AQ9ULE3 1009 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 A0A0J9YVX5 310 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 FTCDO95954 541 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 TRIM14Q14142 442 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 SCARF1Q14162 830 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 IRF2BP1Q8IU81 584 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 ARHGAP18Q8N392 663 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 NKX2-3Q8TAU0 364 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 PIGOQ8TEQ8 1089 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 IFIH1Q9BYX4 1025 aaKnown RBP12.91□□□□□ -0.34
CTCFL-217ENST00000608425 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.91□□□□□ -0.341e-6■□□□□ 10.8
CTCFL-217ENST00000608425 MLXIPLQ9NP71 852 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 PAIP2BQ9ULR5 123 aaKnown RBP12.91□□□□□ -0.34
CTCFL-217ENST00000608425 CAPN11Q9UMQ6 739 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 PCDHB6Q9Y5E3 794 aa12.91□□□□□ -0.34
CTCFL-217ENST00000608425 MYO5AQ9Y4I1 1855 aaKnown RBP12.91□□□□□ -0.34
CTCFL-217ENST00000608425 NKRFO15226 690 aaKnown RBP eCLIP12.9□□□□□ -0.34
CTCFL-217ENST00000608425 RASA1P20936 1047 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 ZAP70P43403 619 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 LSAMPQ13449 338 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 TSNAXIP1Q2TAA8 658 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 CFAP221Q4G0U5 840 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 KLHDC7AQ5VTJ3 777 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 TYW1BQ6NUM6 668 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 TRIM50Q86XT4 487 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 ZNF333Q96JL9 665 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 SPATA16Q9BXB7 569 aa12.9□□□□□ -0.34
CTCFL-217ENST00000608425 VCX3BQ9H321 246 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms