RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 SP4Q02446 784 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 SSRP1Q08945 709 aaKnown RBP11.85□□□□□ -0.51
LINC01001-203ENST00000607448 GNL2Q13823 731 aaKnown RBP11.85□□□□□ -0.51
LINC01001-203ENST00000607448 MFSD10Q14728 455 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 SYCP1Q15431 976 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 PTGISQ16647 500 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 GNPTABQ3T906 1256 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 RASIP1Q5U651 963 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 GPR153Q6NV75 609 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 TRIM50Q86XT4 487 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 LRRC8AQ8IWT6 810 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 AOPEPQ8N6M6 819 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 CYP2W1Q8TAV3 490 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 CACTINQ8WUQ7 758 aaKnown RBP11.85□□□□□ -0.51
LINC01001-203ENST00000607448 DHX38Q92620 1227 aaKnown RBP11.85□□□□□ -0.51
LINC01001-203ENST00000607448 WNT8BQ93098 351 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 MLXIPQ9HAP2 919 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 IL23AQ9NPF7 189 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 RIC8AQ9NPQ8 531 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.85□□□□□ -0.51
LINC01001-203ENST00000607448 PKD2L1Q9P0L9 805 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 GTF2IRD1Q9UHL9 959 aa11.85□□□□□ -0.51
LINC01001-203ENST00000607448 LOXHD1Q8IVV2 1947 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 CCDC196A0A1B0GTZ2 297 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 SMCO2A6NFE2 343 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 SPDYE3A6NKU9 549 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 CUTAO60888 179 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 SUPT20HL2P0C7V6 817 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 KCNA2P16389 499 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 IFNAR1P17181 557 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 PTPN11Q06124 597 aaPredicted RBP11.84□□□□□ -0.51
LINC01001-203ENST00000607448 PFKFB3Q16875 520 aaPredicted RBP11.84□□□□□ -0.51
LINC01001-203ENST00000607448 PPP1R18Q6NYC8 613 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 METTL7BQ6UX53 244 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 OTOP2Q7RTS6 562 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 SESTD1Q86VW0 696 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 GPR20Q99678 358 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 TTYH1Q9H313 450 aaPredicted RBP11.84□□□□□ -0.51
LINC01001-203ENST00000607448 MTMR10Q9NXD2 777 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 UBIAD1Q9Y5Z9 338 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 SPTBN5Q9NRC6 3674 aaKnown RBP11.84□□□□□ -0.51
LINC01001-203ENST00000607448 VCANP13611 3396 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 KIF2AO00139 706 aaPredicted RBP11.84□□□□□ -0.51
LINC01001-203ENST00000607448 NRDCO43847 1150 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 PPFIA4O75335 1185 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 LGALS2P05162 132 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 SCG2P13521 617 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 SYKP43405 635 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 ADCY7P51828 1080 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 LRMPQ12912 555 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 PTPAQ15257 358 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 SAFBQ15424 915 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC01001-203ENST00000607448 DEFB128Q7Z7B8 93 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 TRIM22Q8IYM9 498 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 CCDC150Q8NCX0 1101 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 GUCD1Q96NT3 240 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 ANO3Q9BYT9 981 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 HOOK1Q9UJC3 728 aaKnown RBP11.84□□□□□ -0.51
LINC01001-203ENST00000607448 TUBE1Q9UJT0 475 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 HPSEQ9Y251 543 aa11.84□□□□□ -0.51
LINC01001-203ENST00000607448 hCG_1984214I3L0E3 225 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 CTIFO43310 598 aaKnown RBP11.83□□□□□ -0.52
LINC01001-203ENST00000607448 PRPF3O43395 683 aaKnown RBP11.83□□□□□ -0.52
LINC01001-203ENST00000607448 IQCF3P0C7M6 154 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 PBX2P40425 430 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 KCNJ6P48051 423 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 SMAD3P84022 425 aaKnown RBP11.83□□□□□ -0.52
LINC01001-203ENST00000607448 MTMR1Q13613 665 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 NEDD9Q14511 834 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 GPNMBQ14956 572 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 RESP18Q5W5W9 173 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 XRRA1Q6P2D8 792 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 PSRC1Q6PGN9 363 aaPredicted RBP11.83□□□□□ -0.52
LINC01001-203ENST00000607448 ZNF713Q8N859 430 aaPredicted RBP11.83□□□□□ -0.52
LINC01001-203ENST00000607448 C7orf31Q8N865 590 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 GPRASP2Q96D09 838 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 KATNAL1Q9BW62 490 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 NOD1Q9Y239 953 aa11.83□□□□□ -0.52
LINC01001-203ENST00000607448 MORC2Q9Y6X9 1032 aaPredicted RBP11.83□□□□□ -0.52
LINC01001-203ENST00000607448 MICAL3Q7RTP6 2002 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 H3BRB1 525 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 NOP56O00567 594 aaKnown RBP11.82□□□□□ -0.52
LINC01001-203ENST00000607448 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
LINC01001-203ENST00000607448 FGBP02675 491 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 TUBB4AP04350 444 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 TNNT1P13805 278 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 TPD52L1Q16890 204 aaPredicted RBP11.82□□□□□ -0.52
LINC01001-203ENST00000607448 DPCR1Q3MIW9 517 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 JAKMIP3Q5VZ66 844 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 NLRX1Q86UT6 975 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 RASGRP4Q8TDF6 673 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 HERVK_113Q902F9 699 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 SENP7Q9BQF6 1050 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 SLC26A6Q9BXS9 759 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 FOXP1Q9H334 677 aaPredicted RBP11.82□□□□□ -0.52
LINC01001-203ENST00000607448 TUT1Q9H6E5 874 aaKnown RBP11.82□□□□□ -0.52
LINC01001-203ENST00000607448 JADE2Q9NQC1 790 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 VPS54Q9P1Q0 977 aa11.82□□□□□ -0.52
LINC01001-203ENST00000607448 GSTTP1A0A1W2PQM5 241 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms