RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 ZNF526Q8TF50 670 aaPredicted RBP2.32□□□□□ -2.04
SNORA28-201ENST00000606769 RTF1Q92541 710 aaKnown RBP2.32□□□□□ -2.04
SNORA28-201ENST00000606769 DACT3Q96B18 629 aaPredicted RBP2.32□□□□□ -2.04
SNORA28-201ENST00000606769 ZSWIM3Q96MP5 696 aa2.32□□□□□ -2.04
SNORA28-201ENST00000606769 ASPSCR1Q9BZE9 553 aa2.32□□□□□ -2.04
SNORA28-201ENST00000606769 CCDC8Q9H0W5 538 aaPredicted RBP2.32□□□□□ -2.04
SNORA28-201ENST00000606769 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.32□□□□□ -2.04
SNORA28-201ENST00000606769 CABP5Q9NP86 173 aa2.32□□□□□ -2.04
SNORA28-201ENST00000606769 TOPORSQ9NS56 1045 aaPredicted RBP2.32□□□□□ -2.04
SNORA28-201ENST00000606769 KCND1Q9NSA2 647 aa2.32□□□□□ -2.04
SNORA28-201ENST00000606769 SIRT5Q9NXA8 310 aa2.32□□□□□ -2.04
SNORA28-201ENST00000606769 SMG5Q9UPR3 1016 aaKnown RBP2.32□□□□□ -2.04
SNORA28-201ENST00000606769 NOP58Q9Y2X3 529 aaKnown RBP2.32□□□□□ -2.04
SNORA28-201ENST00000606769 RNF114Q9Y508 228 aa2.32□□□□□ -2.04
SNORA28-201ENST00000606769 WASHC2CQ9Y4E1 1318 aa2.32□□□□□ -2.04
SNORA28-201ENST00000606769 A0A1B0GTL3 188 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 PRAMEF22A3QJZ6 481 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 PRAMEF25A6NGN4 478 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 H7C1D1 291 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 GABRDO14764 452 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 BRINP1O60477 761 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 MAFKO60675 156 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 GAS7O60861 476 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 KATNA1O75449 491 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 KLHL18O94889 574 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 TSPAN15O95858 294 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 KNG1P01042 644 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 CELA3BP08861 270 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 CNGA1P29973 690 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 RGS3P49796 1198 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 KPNA1P52294 538 aaPredicted RBP2.31□□□□□ -2.04
SNORA28-201ENST00000606769 IL2P60568 153 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 IL13RA1P78552 427 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 TMPRSS15P98073 1019 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 ALDH6A1Q02252 535 aaKnown RBP2.31□□□□□ -2.04
SNORA28-201ENST00000606769 TMEM62Q0P6H9 643 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 SMAD4Q13485 552 aaKnown RBP2.31□□□□□ -2.04
SNORA28-201ENST00000606769 FAM50AQ14320 339 aaKnown RBP2.31□□□□□ -2.04
SNORA28-201ENST00000606769 LRRC32Q14392 662 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 SKIDA1Q1XH10 827 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 ATP13A4Q4VNC1 1196 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 BRDTQ58F21 947 aaPredicted RBP2.31□□□□□ -2.04
SNORA28-201ENST00000606769 PRAMEF18Q5VWM3 479 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 ATG14Q6ZNE5 492 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 SAPCD2Q86UD0 394 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 ZNF610Q8N9Z0 462 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 WDR66Q8TBY9 1149 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 LMBR1Q8WVP7 490 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 SLC5A5Q92911 643 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 KCNN1Q92952 543 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 FAM84AQ96KN4 292 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 SIGLEC10Q96LC7 697 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 GBP4Q96PP9 640 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 ORAI2Q96SN7 254 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 TTC1Q99614 292 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 ZDHHC5Q9C0B5 715 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 TMX1Q9H3N1 280 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 ACSS2Q9NR19 701 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 UCKL1Q9NWZ5 548 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 DDX56Q9NY93 547 aaKnown RBP2.31□□□□□ -2.04
SNORA28-201ENST00000606769 APOBEC2Q9Y235 224 aaKnown RBP2.31□□□□□ -2.04
SNORA28-201ENST00000606769 ZKSCAN5Q9Y2L8 839 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 THRAP3Q9Y2W1 955 aaKnown RBP2.31□□□□□ -2.04
SNORA28-201ENST00000606769 ASB1Q9Y576 335 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 PPP2R3BQ9Y5P8 575 aa2.31□□□□□ -2.04
SNORA28-201ENST00000606769 A0A0A6YYK5 440 aaPredicted RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 PCDHGA12O60330 932 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 H2AFYO75367 372 aaKnown RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 FARP2O94887 1054 aaPredicted RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 CYP17A1P05093 508 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 C8AP07357 584 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 ENO2P09104 434 aaPredicted RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 CYP2C8P10632 490 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 ZNF28P17035 718 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 PTGS1P23219 599 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 GPR3P46089 330 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 MANFP55145 182 aaKnown RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 ANTXR2P58335 489 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 LINC00310P59036 64 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 NKX3-2P78367 333 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 RBM10P98175 930 aaKnown RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 CAP1Q01518 475 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 TRIM25Q14258 630 aaKnown RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 TARBP2Q15633 366 aaKnown RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 PLEKHG6Q3KR16 790 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 TAF7LQ5H9L4 462 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 RNF219Q5W0B1 726 aaPredicted RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 NECAB2Q7Z6G3 386 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 RASSF3Q86WH2 238 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 CXorf67Q86X51 503 aaPredicted RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 SPATS2Q86XZ4 545 aaKnown RBP2.3□□□□□ -2.04
SNORA28-201ENST00000606769 STPG3Q8N7X2 389 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 CNTD1Q8N815 330 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 KYQ8NBH2 561 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 IGDCC4Q8TDY8 1250 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 USP7Q93009 1102 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 MBD6Q96DN6 1003 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 MAML3Q96JK9 1138 aa2.3□□□□□ -2.04
SNORA28-201ENST00000606769 PUS7Q96PZ0 661 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms