RNA–Protein interactions for RNA: ENST00000606454.1

AL390728.4-204, humanhuman

TSL 3

Gene AL390728.4, Length 660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.4-204ENST00000606454 U2AF2P26368 475 aaKnown RBP eCLIP17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 PPP2R5CQ13362 524 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 CUL4AQ13619 759 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 CALCRLQ16602 461 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 ZNF484Q5JVG2 852 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 TRAF7Q6Q0C0 670 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 RUFY4Q6ZNE9 571 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 TRMT1LQ7Z2T5 733 aaKnown RBP17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 RPAINQ86UA6 219 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 TRAPPC12Q8WVT3 735 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 NRBP2Q9NSY0 501 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 VAV3Q9UKW4 847 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 IGSF9BQ9UPX0 1349 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 TRIOBPQ9H2D6 2365 aa17.1■□□□□ 0.33
AL390728.4-204ENST00000606454 H3BQV1 296 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 WNT7AO00755 349 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 NBNO60934 754 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 GPNMBQ14956 572 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 RASIP1Q5U651 963 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 MTHFD1LQ6UB35 978 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 DNAJB3Q8WWF6 145 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 LRCH3Q96II8 777 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 NOL7Q9UMY1 257 aaKnown RBP17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 PCDHA12Q9UN75 941 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 CEP131Q9UPN4 1083 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 PCDHA2Q9Y5H9 948 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 COL1A2P08123 1366 aa17.09■□□□□ 0.33
AL390728.4-204ENST00000606454 LAMA3Q16787 3333 aa17.08■□□□□ 0.33
AL390728.4-204ENST00000606454 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 KIF28PB7ZC32 967 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 EML1O00423 815 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 ZNF862O60290 1169 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 CXCL10P02778 98 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 OATP04181 439 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 CTSHP09668 335 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 KLRC1P26715 233 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 MCM7P33993 719 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 TRAPPC10P48553 1259 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 PRKCEQ02156 737 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 ORC2Q13416 577 aaPredicted RBP17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 UGCGQ16739 394 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 FAM26DQ5JW98 314 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 MCTP1Q6DN14 999 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 ZBTB10Q96DT7 871 aa17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 CXXC1Q9P0U4 656 aaPredicted RBP17.08■□□□□ 0.32
AL390728.4-204ENST00000606454 SMIM35A0A1B0GVV1 85 aa17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 ZBBXA8MT70 800 aa17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 ZBTB42B2RXF5 422 aa17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 K7ELQ4 463 aaPredicted RBP17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 TXKP42681 527 aa17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 PSMC5P62195 406 aa17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 SMAD3P84022 425 aaKnown RBP17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 MBTPS1Q14703 1052 aa17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 EPHA7Q15375 998 aa17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 TTC38Q5R3I4 469 aa17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 LARP1BQ659C4 914 aaKnown RBP17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 GPR153Q6NV75 609 aa17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 MTMR9Q96QG7 549 aa17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 FAM49AQ9H0Q0 323 aaPredicted RBP17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 TTC12Q9H892 705 aaPredicted RBP17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 SLC4A7Q9Y6M7 1214 aa17.07■□□□□ 0.32
AL390728.4-204ENST00000606454 DKC1O60832 514 aaKnown RBP eCLIP17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 BAIAP3O94812 1187 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 CHRNA1P02708 482 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 P4HBP07237 508 aaKnown RBP17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 QARSP47897 775 aaKnown RBP17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 SPIRE1Q08AE8 756 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 ZNF174Q15697 407 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 XKR3Q5GH77 459 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 IER5Q5VY09 327 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 NCAPH2Q6IBW4 605 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 CNKSR3Q6P9H4 555 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 NME8Q8N427 588 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 BANK1Q8NDB2 785 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 SNX21Q969T3 373 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 TMEM60Q9H2L4 133 aa17.06■□□□□ 0.32
AL390728.4-204ENST00000606454 LAMA2P24043 3122 aaKnown RBP17.05■□□□□ 0.32
AL390728.4-204ENST00000606454 M0QZ92 97 aa17.05■□□□□ 0.32
AL390728.4-204ENST00000606454 MAGEB2O15479 319 aa17.05■□□□□ 0.32
AL390728.4-204ENST00000606454 C22orf31O95567 290 aa17.05■□□□□ 0.32
AL390728.4-204ENST00000606454 MRPS6P82932 125 aaKnown RBP17.05■□□□□ 0.32
AL390728.4-204ENST00000606454 INTS4Q96HW7 963 aaKnown RBP17.05■□□□□ 0.32
AL390728.4-204ENST00000606454 NIFKQ9BYG3 293 aaKnown RBP17.05■□□□□ 0.32
AL390728.4-204ENST00000606454 SEPT9Q9UHD8 586 aaPredicted RBP17.05■□□□□ 0.32
AL390728.4-204ENST00000606454 ABHD14A-ACY1A0A1B0GW23 586 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 DDX11L8A8MPP1 907 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 OR52Z1P0C646 297 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 PDCP20941 246 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 MGAT3Q09327 533 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 IKBKEQ14164 716 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 PLEKHG4Q58EX7 1191 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 KIAA0319LQ8IZA0 1049 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 METTL13Q8N6R0 699 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 DBF4BQ8NFT6 615 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 SEPT8Q92599 483 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 CDY2AQ9Y6F7 541 aa17.04■□□□□ 0.32
AL390728.4-204ENST00000606454 EFCAB14O75071 495 aa17.03■□□□□ 0.32
AL390728.4-204ENST00000606454 STBD1O95210 358 aa17.03■□□□□ 0.32
AL390728.4-204ENST00000606454 ATP2A2P16615 1042 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms