RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 STAG3Q9UJ98 1225 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 ANKRD34BA5PLL1 514 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 PIK3CDO00329 1044 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 ARHGAP33O14559 1287 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 FARP2O94887 1054 aaPredicted RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 SKIV2L2P42285 1042 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 HSD17B4P51659 736 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 KPNA1P52294 538 aaPredicted RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 SEC24CP53992 1094 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 AMPD3Q01432 767 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 TRAP1Q12931 704 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 TBX2Q13207 712 aaPredicted RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 ITGB3BPQ13352 177 aaPredicted RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 SNX30Q5VWJ9 437 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 DENND2CQ68D51 928 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 SNRNP48Q6IEG0 339 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 TREML1Q86YW5 311 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 MREGQ8N565 214 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 PLEKHO2Q8TD55 490 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 GLMNQ92990 594 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 ERP44Q9BS26 406 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 HAUS8Q9BT25 410 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 HERC2P3Q9BVR0 1158 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 CRNKL1Q9BZJ0 848 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 SERHL2Q9H4I8 314 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 VTA1Q9NP79 307 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 PAG1Q9NWQ8 432 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 CFL2Q9Y281 166 aa9.58□□□□□ -0.88
COMMD3-215ENST00000602574 ARHGEF28Q8N1W1 1705 aaKnown RBP9.58□□□□□ -0.88
COMMD3-215ENST00000602574 KIF20BQ96Q89 1820 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 MROH2AA6NES4 1674 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 ADGRB1O14514 1584 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 ABCC4O15439 1325 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 hCG_2014768A0A024R1R8 64 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 RASA4BC9J798 803 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 RASA4O43374 803 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 TCF3P15923 654 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 ANXA13P27216 316 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 TSPAN7P41732 249 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 MSH2P43246 934 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 KRT83P78385 493 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 EXOSC9Q06265 439 aaKnown RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 PAK2Q13177 524 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 RASGRF1Q13972 1273 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 CTC1Q2NKJ3 1217 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 OLFML2BQ68BL8 750 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 TBC1D1Q86TI0 1168 aaPredicted RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 SPATA24Q86W54 205 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 PPFIBP2Q8ND30 876 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 DDHD1Q8NEL9 900 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 BRSK1Q8TDC3 778 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 STK32AQ8WU08 396 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 ATP6V1G3Q96LB4 118 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 CCDC177Q9NQR7 707 aaPredicted RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 NOB1Q9ULX3 412 aaKnown RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 AKR1B15C9JRZ8 316 aaPredicted RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 HIP1O00291 1037 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 NMT2O60551 498 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 ZFYP08048 801 aaPredicted RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 GLULP15104 373 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 PLCG2P16885 1265 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 CD53P19397 219 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 TMOD1P28289 359 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 HSPA1LP34931 641 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 TMPOP42166 694 aaKnown RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 CDK7P50613 346 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 GUCY2DQ02846 1103 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 CEBPZQ03701 1054 aaKnown RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 GBE1Q04446 702 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 EPHA7Q15375 998 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 ZNF423Q2M1K9 1284 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 NAALADL2Q58DX5 795 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 CEP78Q5JTW2 689 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 SPATA1Q5VX52 437 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 TMEM214Q6NUQ4 689 aaKnown RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 SIX5Q8N196 739 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 GAB3Q8WWW8 586 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 ZNF333Q96JL9 665 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 RAB3IPQ96QF0 476 aaPredicted RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 API5Q9BZZ5 524 aaKnown RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 KRT23Q9C075 422 aa9.57□□□□□ -0.88
COMMD3-215ENST00000602574 XAB2Q9HCS7 855 aaKnown RBP9.57□□□□□ -0.88
COMMD3-215ENST00000602574 CD109Q6YHK3 1445 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 GOLGA8MH3BSY2 632 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 ZBTB7BO15156 539 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-215ENST00000602574 NR1I2O75469 434 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 RNASEH2AO75792 299 aaKnown RBP9.56□□□□□ -0.88
COMMD3-215ENST00000602574 GNL1P36915 607 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-215ENST00000602574 CCNFP41002 786 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 TXKP42681 527 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 POLD2P49005 469 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 NCALDP61601 193 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 ACAP1Q15027 740 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 MAPRE2Q15555 327 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 ANO4Q32M45 955 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 CDONQ4KMG0 1287 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 C6orf183Q5T699 404 aa9.56□□□□□ -0.88
COMMD3-215ENST00000602574 BARGINQ6ZT62 677 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms