RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 KRT23Q9C075 422 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 IRF2BPLQ9H1B7 796 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 S1PR5Q9H228 398 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 GTF3C3Q9Y5Q9 886 aa11.47□□□□□ -0.57
HIF3A-219ENST00000600879 PLXNA4Q9HCM2 1894 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 FRMPD4Q14CM0 1322 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 GSTTP1A0A1W2PQM5 241 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 C2CD4DB7Z1M9 353 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 CYTH3O43739 400 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 STAG3L1P0CL83 205 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 ATF7P17544 494 aaPredicted RBP11.46□□□□□ -0.57
HIF3A-219ENST00000600879 PAK2Q13177 524 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 SEC23AQ15436 765 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 DUSP6Q16828 381 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 IMMTQ16891 758 aaKnown RBP11.46□□□□□ -0.57
HIF3A-219ENST00000600879 KANK3Q6NY19 840 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 SAMD3Q8N6K7 520 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 SMARCC2Q8TAQ2 1214 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 TRAPPC12Q8WVT3 735 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 LNPKQ9C0E8 428 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 SENP2Q9HC62 589 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 PADI3Q9ULW8 664 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 TRPV2Q9Y5S1 764 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 TTC3P53804 2025 aa11.46□□□□□ -0.57
HIF3A-219ENST00000600879 PNMA6FA0A0J9YX94 578 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 MBLAC1A4D2B0 266 aaPredicted RBP11.45□□□□□ -0.58
HIF3A-219ENST00000600879 TBKBP1A7MCY6 615 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 HIDE1A8MVS5 230 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 PI15O43692 258 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 STAM2O75886 525 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 FGF18O76093 207 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 INSRRP14616 1297 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 PBX3P40426 434 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 NFX1Q12986 1120 aaKnown RBP11.45□□□□□ -0.58
HIF3A-219ENST00000600879 GRM4Q14833 912 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 FAM102BQ5T8I3 360 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 B4GALNT3Q6L9W6 998 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 ANKRD54Q6NXT1 300 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 NLRX1Q86UT6 975 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 THNSL1Q8IYQ7 743 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 FLCNQ8NFG4 579 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 SEPT1Q8WYJ6 367 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 RMDN1Q96DB5 314 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 FTHL17Q9BXU8 183 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 TMX1Q9H3N1 280 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 POMKQ9H5K3 350 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 RIOX1Q9H6W3 641 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 DIAPH3Q9NSV4 1193 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 TMEM260Q9NX78 707 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 ERAP1Q9NZ08 941 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 GINS2Q9Y248 185 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 PCDHB12Q9Y5F1 795 aa11.45□□□□□ -0.58
HIF3A-219ENST00000600879 M0QZ92 97 aa11.44□□□□□ -0.58
HIF3A-219ENST00000600879 MGEA5O60502 916 aa11.44□□□□□ -0.58
HIF3A-219ENST00000600879 KCNA2P16389 499 aa11.44□□□□□ -0.58
HIF3A-219ENST00000600879 TRAF1Q13077 416 aa11.44□□□□□ -0.58
HIF3A-219ENST00000600879 MTMR3Q13615 1198 aa11.44□□□□□ -0.58
HIF3A-219ENST00000600879 IER5Q5VY09 327 aa11.44□□□□□ -0.58
HIF3A-219ENST00000600879 PCNX4Q63HM2 1172 aa11.44□□□□□ -0.58
HIF3A-219ENST00000600879 ASTLQ6HA08 431 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-219ENST00000600879 CUL5Q93034 780 aa11.44□□□□□ -0.58
HIF3A-219ENST00000600879 SENP7Q9BQF6 1050 aa11.44□□□□□ -0.58
HIF3A-219ENST00000600879 MFSD1Q9H3U5 465 aa11.44□□□□□ -0.58
HIF3A-219ENST00000600879 CNNM2Q9H8M5 875 aa11.44□□□□□ -0.58
HIF3A-219ENST00000600879 RIF1Q5UIP0 2472 aaKnown RBP11.43□□□□□ -0.58
HIF3A-219ENST00000600879 IFIT3O14879 490 aaKnown RBP11.43□□□□□ -0.58
HIF3A-219ENST00000600879 FGFR1P11362 822 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 NT5C2P49902 561 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 KCNC3Q14003 757 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 CENPQQ7L2Z9 268 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-219ENST00000600879 SMC5Q8IY18 1101 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 KIAA2013Q8IYS2 634 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 C12orf76Q8N812 135 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-219ENST00000600879 COLGALT1Q8NBJ5 622 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 PPP1R16BQ96T49 567 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 PCYT2Q99447 389 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 TCF25Q9BQ70 676 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 CELF4Q9BZC1 486 aaKnown RBP11.43□□□□□ -0.58
HIF3A-219ENST00000600879 SMARCAD1Q9H4L7 1026 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 ENTPD7Q9NQZ7 604 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 AAASQ9NRG9 546 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 TYW1Q9NV66 732 aaKnown RBP11.43□□□□□ -0.58
HIF3A-219ENST00000600879 LIMD1Q9UGP4 676 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 SORCS3Q9UPU3 1222 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 PCDHB7Q9Y5E2 793 aa11.43□□□□□ -0.58
HIF3A-219ENST00000600879 BAZ2BQ9UIF8 2168 aaKnown RBP11.43□□□□□ -0.58
HIF3A-219ENST00000600879 IGSF9BQ9UPX0 1349 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 KAT6AQ92794 2004 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 MEIS2O14770 477 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 FSCN2O14926 492 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 SRGAP2BP0DMP2 458 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 ITGB5P18084 799 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 SARSP49591 514 aaKnown RBP11.42□□□□□ -0.58
HIF3A-219ENST00000600879 KRT76Q01546 638 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 UBE3AQ05086 875 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 PLCB4Q15147 1175 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 CWF19L1Q69YN2 538 aaKnown RBP11.42□□□□□ -0.58
HIF3A-219ENST00000600879 GIMAP8Q8ND71 665 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-219ENST00000600879 KCNG4Q8TDN1 519 aa11.42□□□□□ -0.58
HIF3A-219ENST00000600879 CDCA3Q99618 268 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms