RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 SPRYD3Q8NCJ5 442 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 MTIF3Q9H2K0 278 aaKnown RBP14.6□□□□□ -0.07
SRRM1-223ENST00000600523 ZSWIM4Q9H7M6 989 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 PCDHB6Q9Y5E3 794 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 IGSF9BQ9UPX0 1349 aa14.6□□□□□ -0.07
SRRM1-223ENST00000600523 MAGEB2O15479 319 aa14.59□□□□□ -0.07
SRRM1-223ENST00000600523 TREHO43280 583 aa14.59□□□□□ -0.07
SRRM1-223ENST00000600523 PFKMP08237 780 aa14.59□□□□□ -0.07
SRRM1-223ENST00000600523 SELPP16109 830 aa14.59□□□□□ -0.07
SRRM1-223ENST00000600523 TMOD1P28289 359 aa14.59□□□□□ -0.07
SRRM1-223ENST00000600523 HOXC8P31273 242 aa14.59□□□□□ -0.07
SRRM1-223ENST00000600523 TECP42680 631 aa14.59□□□□□ -0.07
SRRM1-223ENST00000600523 CCL23P55773 120 aa14.59□□□□□ -0.07
SRRM1-223ENST00000600523 B3GNT9Q6UX72 402 aa14.59□□□□□ -0.07
SRRM1-223ENST00000600523 CHRDL2Q6WN34 429 aa14.59□□□□□ -0.07
SRRM1-223ENST00000600523 BANK1Q8NDB2 785 aa14.59□□□□□ -0.07
SRRM1-223ENST00000600523 SEPT9Q9UHD8 586 aaPredicted RBP14.59□□□□□ -0.07
SRRM1-223ENST00000600523 A0A1W2PPC1 479 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 DDX11L8A8MPP1 907 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 IQCF3P0C7M6 154 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 ACTN1P12814 892 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 BMP8BP34820 402 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 PRPHP41219 470 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 TOB1P50616 345 aaPredicted RBP14.58□□□□□ -0.08
SRRM1-223ENST00000600523 ZNF200P98182 395 aaPredicted RBP14.58□□□□□ -0.08
SRRM1-223ENST00000600523 TBC1D8BQ0IIM8 1120 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 PDIA5Q14554 519 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 IER5Q5VY09 327 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 PSRC1Q6PGN9 363 aaPredicted RBP14.58□□□□□ -0.08
SRRM1-223ENST00000600523 LRRC8DQ7L1W4 858 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 TPH2Q8IWU9 490 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 METTL13Q8N6R0 699 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 GDF15Q99988 308 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 JPH2Q9BR39 696 aaPredicted RBP14.58□□□□□ -0.08
SRRM1-223ENST00000600523 LXNQ9BS40 222 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 TMEM60Q9H2L4 133 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.58□□□□□ -0.08
SRRM1-223ENST00000600523 LRWD1Q9UFC0 647 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 MTMR6Q9Y217 621 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 PPME1Q9Y570 386 aa14.58□□□□□ -0.08
SRRM1-223ENST00000600523 MKI67P46013 3256 aaKnown RBP14.57□□□□□ -0.08
SRRM1-223ENST00000600523 MBLAC1A4D2B0 266 aaPredicted RBP14.57□□□□□ -0.08
SRRM1-223ENST00000600523 RSPH10B2B2RC85 870 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 EML1O00423 815 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 WNT7AO00755 349 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 RSPH10BP0C881 870 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 CKBP12277 381 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 CSF2RAP15509 400 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 KLRC1P26715 233 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 ANP32AP39687 249 aaKnown RBP14.57□□□□□ -0.08
SRRM1-223ENST00000600523 DNM2P50570 870 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
SRRM1-223ENST00000600523 CYP4A11Q02928 519 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 RBL2Q08999 1139 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 NBR1Q14596 966 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 KRT79Q5XKE5 535 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 ARL6IP4Q66PJ3 421 aaKnown RBP14.57□□□□□ -0.08
SRRM1-223ENST00000600523 C4orf19Q8IY42 314 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 ZNF710Q8N1W2 664 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 NME8Q8N427 588 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 ZNF396Q96N95 335 aaPredicted RBP14.57□□□□□ -0.08
SRRM1-223ENST00000600523 MAP7D2Q96T17 732 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 EIF2AK1Q9BQI3 630 aaKnown RBP14.57□□□□□ -0.08
SRRM1-223ENST00000600523 FTOQ9C0B1 505 aaKnown RBP eCLIP14.57□□□□□ -0.08
SRRM1-223ENST00000600523 FAM49AQ9H0Q0 323 aaPredicted RBP14.57□□□□□ -0.08
SRRM1-223ENST00000600523 PCDHA2Q9Y5H9 948 aa14.57□□□□□ -0.08
SRRM1-223ENST00000600523 SMIM35A0A1B0GVV1 85 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 POTEMA6NI47 508 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 ITGB8P26012 769 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 YWHABP31946 246 aaKnown RBP14.56□□□□□ -0.08
SRRM1-223ENST00000600523 ADAM17P78536 824 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 ATP2C1P98194 919 aaPredicted RBP14.56□□□□□ -0.08
SRRM1-223ENST00000600523 SPIRE1Q08AE8 756 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 MTHFD1LQ6UB35 978 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 RPAINQ86UA6 219 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 SLC7A3Q8WY07 619 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 DYDC2Q96IM9 177 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 NIFKQ9BYG3 293 aaKnown RBP14.56□□□□□ -0.08
SRRM1-223ENST00000600523 TUFT1Q9NNX1 390 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 IL23AQ9NPF7 189 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 KAT6AQ92794 2004 aa14.56□□□□□ -0.08
SRRM1-223ENST00000600523 MYH9P35579 1960 aaKnown RBP14.55□□□□□ -0.08
SRRM1-223ENST00000600523 ZNF862O60290 1169 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 CTSHP09668 335 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 ZSCAN22P10073 491 aaPredicted RBP14.55□□□□□ -0.08
SRRM1-223ENST00000600523 ATP4AP20648 1035 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 MUTP22033 750 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 CDC42EP1Q00587 391 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 RESTQ13127 1097 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 CTTNQ14247 550 aaKnown RBP14.55□□□□□ -0.08
SRRM1-223ENST00000600523 HIC1Q14526 733 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 UGCGQ16739 394 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 MTERF2Q49AM1 385 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 MARCH8Q5T0T0 291 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 ZNF618Q5T7W0 954 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 DEFB128Q7Z7B8 93 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 TDHQ8IZJ6 230 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 TRAPPC12Q8WVT3 735 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 DNAJB3Q8WWF6 145 aa14.55□□□□□ -0.08
SRRM1-223ENST00000600523 SCLYQ96I15 445 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms