RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 CLTBP09497 229 aa18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 PRKCEQ02156 737 aa18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 MLLT1Q03111 559 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 STK38Q15208 465 aa18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 KRT79Q5XKE5 535 aa18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 TAF2Q6P1X5 1199 aa18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 CCDC155Q8N6L0 562 aa18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 LINC00301Q8NCQ3 95 aa18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 DPF3Q92784 378 aa18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 IPO9Q96P70 1041 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 LXNQ9BS40 222 aa18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 NIFKQ9BYG3 293 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-219ENST00000599575 MBLAC1A4D2B0 266 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 VWA3AA6NCI4 1184 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 ZNF862O60290 1169 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 CAND2O75155 1236 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 INSRRP14616 1297 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 ATP4AP20648 1035 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 MARK3P27448 753 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 CHMP4BP1P59074 171 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 KRT85P78386 507 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 ADAM17P78536 824 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 PTK7Q13308 1070 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 GRIK4Q16099 956 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 PTGISQ16647 500 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 ZNF710Q8N1W2 664 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 KRI1Q8N9T8 703 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 JPH2Q9BR39 696 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 SCAND2PQ9GZW5 306 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 PRKAG2Q9UGJ0 569 aa18.55■□□□□ 0.56
SHKBP1-219ENST00000599575 KDM3AQ9Y4C1 1321 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 SPTLC2O15270 562 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 MAGEB2O15479 319 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 B4GALT4O60513 344 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 FAAP100Q0VG06 881 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 IL17AQ16552 155 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 FOXD4L5Q5VV16 416 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 GDF6Q6KF10 455 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 RPAINQ86UA6 219 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 SERINC5Q86VE9 423 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 TPH2Q8IWU9 490 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 BANK1Q8NDB2 785 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 CAGE1Q8TC20 777 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 LMBR1Q8WVP7 490 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 FOXD4L4Q8WXT5 416 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 DYDC2Q96IM9 177 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 NACC1Q96RE7 527 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 NT5C3AQ9H0P0 336 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 ANKEF1Q9NU02 776 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 CHMP5Q9NZZ3 219 aa18.54■□□□□ 0.56
SHKBP1-219ENST00000599575 PITPNM1O00562 1244 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 KIAA0355O15063 1070 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 UBA7P41226 1012 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 RBL2Q08999 1139 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 BFSP2Q13515 415 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 UGCGQ16739 394 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 CATSPER3Q86XQ3 398 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 ZNF579Q8NAF0 562 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 TRPV6Q9H1D0 765 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 TMEM39AQ9NV64 488 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 SETD4Q9NVD3 440 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 RGL1Q9NZL6 768 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 TUBE1Q9UJT0 475 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 FBXO2Q9UK22 296 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 RCOR1Q9UKL0 485 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 TBX21Q9UL17 535 aa18.53■□□□□ 0.56
SHKBP1-219ENST00000599575 STBD1O95210 358 aa18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 PARNO95453 639 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 SPATA31C1P0DKV0 1188 aa18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 YWHABP31946 246 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 CCT6AP40227 531 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 CYP4A11Q02928 519 aa18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 CEBPZQ03701 1054 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 DNM1Q05193 864 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 TARBP2Q15633 366 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 HYIQ5T013 277 aa18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 RSPH3Q86UC2 560 aa18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 NME8Q8N427 588 aa18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 RETREG2Q8NC44 543 aa18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 SNX29Q8TEQ0 813 aa18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 FTOQ9C0B1 505 aaKnown RBP eCLIP18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 PDLIM7Q9NR12 457 aa18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 TRMT13Q9NUP7 481 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 TFIP11Q9UBB9 837 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 DBR1Q9UK59 544 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 PCDHA2Q9Y5H9 948 aa18.52■□□□□ 0.56
SHKBP1-219ENST00000599575 DOCK5Q9H7D0 1870 aa18.52■□□□□ 0.55
SHKBP1-219ENST00000599575 DDX11L8A8MPP1 907 aa18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 GAS2O43903 313 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 TXLNAP40222 546 aa18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 RFC5P40937 340 aa18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 CDC42EP1Q00587 391 aa18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 CTTNQ14247 550 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 MARCH8Q5T0T0 291 aa18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 FAM43BQ6ZT52 329 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 ANO5Q75V66 913 aa18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 CCSER1Q9C0I3 900 aa18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 CYP26B1Q9NR63 512 aa18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 SEPT9Q9UHD8 586 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-219ENST00000599575 SMIM35A0A1B0GVV1 85 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms