RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 FEZ2Q9UHY8 353 aaPredicted RBP16.03■□□□□ 0.16
SYMPK-213ENST00000599460 PCDHA10Q9Y5I2 948 aa16.03■□□□□ 0.16
SYMPK-213ENST00000599460 ATP2C2O75185 946 aa16.03■□□□□ 0.16
SYMPK-213ENST00000599460 EIF4A3P38919 411 aaKnown RBP16.03■□□□□ 0.16
SYMPK-213ENST00000599460 MYO1EQ12965 1108 aa16.03■□□□□ 0.16
SYMPK-213ENST00000599460 SND1Q7KZF4 910 aaKnown RBP eCLIP16.03■□□□□ 0.16
SYMPK-213ENST00000599460 TRIM50Q86XT4 487 aa16.03■□□□□ 0.16
SYMPK-213ENST00000599460 FAM76AQ8TAV0 307 aa16.03■□□□□ 0.16
SYMPK-213ENST00000599460 ZNF653Q96CK0 615 aa16.03■□□□□ 0.16
SYMPK-213ENST00000599460 MAPK6Q16659 721 aa16.03■□□□□ 0.16
SYMPK-213ENST00000599460 PROM2Q8N271 834 aa16.03■□□□□ 0.16
SYMPK-213ENST00000599460 ACRBPQ8NEB7 543 aa16.03■□□□□ 0.16
SYMPK-213ENST00000599460 RSAD2Q8WXG1 361 aa16.03■□□□□ 0.16
SYMPK-213ENST00000599460 RAB17Q9H0T7 212 aa16.03■□□□□ 0.16
SYMPK-213ENST00000599460 TCRBV5S4A2TA0A5A2 114 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 DENND3A2RUS2 1198 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 RNF8O76064 485 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 KNOP1Q1ED39 458 aaKnown RBP16.02■□□□□ 0.16
SYMPK-213ENST00000599460 CCDC94Q9BW85 323 aaPredicted RBP16.02■□□□□ 0.16
SYMPK-213ENST00000599460 RGL1Q9NZL6 768 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 KNDC1Q76NI1 1749 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 SYNJ2BP-COX16A0A087WUM0 186 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 MYO1FO00160 1098 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 CLDN3O15551 220 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 SERPING1P05155 500 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 SMARCA1P28370 1054 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 TROAPQ12815 778 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 BPIFA3Q9BQP9 254 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 COX16Q9P0S2 106 aa16.02■□□□□ 0.16
SYMPK-213ENST00000599460 GNAT1P11488 350 aa16.02■□□□□ 0.15
SYMPK-213ENST00000599460 TKFCQ3LXA3 575 aa16.02■□□□□ 0.15
SYMPK-213ENST00000599460 SCARA5Q6ZMJ2 495 aa16.02■□□□□ 0.15
SYMPK-213ENST00000599460 METTL23Q86XA0 190 aa16.02■□□□□ 0.15
SYMPK-213ENST00000599460 KCNB2Q92953 911 aa16.02■□□□□ 0.15
SYMPK-213ENST00000599460 POLR3FQ9H1D9 316 aaPredicted RBP16.02■□□□□ 0.15
SYMPK-213ENST00000599460 JPH1Q9HDC5 661 aaPredicted RBP16.02■□□□□ 0.15
SYMPK-213ENST00000599460 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.02■□□□□ 0.15
SYMPK-213ENST00000599460 ATP5DP30049 168 aa16.02■□□□□ 0.15
SYMPK-213ENST00000599460 RHPN2Q8IUC4 686 aa16.02■□□□□ 0.15
SYMPK-213ENST00000599460 SLC35F6Q8N357 371 aa16.02■□□□□ 0.15
SYMPK-213ENST00000599460 XXYLT1Q8NBI6 393 aa16.02■□□□□ 0.15
SYMPK-213ENST00000599460 PPANQ9NQ55 473 aaKnown RBP16.02■□□□□ 0.15
SYMPK-213ENST00000599460 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.15
SYMPK-213ENST00000599460 ENC1O14682 589 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 IFNB1P01574 187 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 NFX1Q12986 1120 aaKnown RBP16.01■□□□□ 0.15
SYMPK-213ENST00000599460 PSPC1Q8WXF1 523 aaKnown RBP16.01■□□□□ 0.15
SYMPK-213ENST00000599460 ZKSCAN4Q969J2 545 aaPredicted RBP16.01■□□□□ 0.15
SYMPK-213ENST00000599460 TRIM11Q96F44 468 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 CAPN2P17655 700 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 PHKA2P46019 1235 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 ZMYND12Q9H0C1 365 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 TUFT1Q9NNX1 390 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 SPTLC3Q9NUV7 552 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 SALL1Q9NSC2 1324 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 HPDP32754 393 aaPredicted RBP16.01■□□□□ 0.15
SYMPK-213ENST00000599460 PANX2Q96RD6 677 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 CXCL9Q07325 125 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 SCYL3Q8IZE3 742 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 AGBL1Q96MI9 1066 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 IVLP07476 585 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 CAP2P40123 477 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 ZNF157P51786 506 aaPredicted RBP16.01■□□□□ 0.15
SYMPK-213ENST00000599460 C7orf31Q8N865 590 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 CEP63Q96MT8 703 aa16.01■□□□□ 0.15
SYMPK-213ENST00000599460 SHPRHQ149N8 1683 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 EYA4O95677 639 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 PPP2R5DQ14738 602 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 KAZNQ674X7 775 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 SARM1Q6SZW1 724 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 METTL16Q86W50 562 aaKnown RBP16■□□□□ 0.15
SYMPK-213ENST00000599460 TYW1Q9NV66 732 aaKnown RBP16■□□□□ 0.15
SYMPK-213ENST00000599460 SEL1LQ9UBV2 794 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 DDX41Q9UJV9 622 aaKnown RBP16■□□□□ 0.15
SYMPK-213ENST00000599460 MON2Q7Z3U7 1717 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 YWHABP31946 246 aaKnown RBP16■□□□□ 0.15
SYMPK-213ENST00000599460 NBPF11Q86T75 865 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 CCDC170Q8IYT3 715 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 FAM213AQ9BRX8 229 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 MED1Q15648 1581 aaPredicted RBP16■□□□□ 0.15
SYMPK-213ENST00000599460 MED7O43513 233 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 HIP1RO75146 1068 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 TXNP10599 105 aaKnown RBP16■□□□□ 0.15
SYMPK-213ENST00000599460 MAPK4P31152 587 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 C9orf131Q5VYM1 1079 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 CASC4Q6P4E1 433 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 NKIRAS1Q9NYS0 192 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 NPHP3-ACAD11A0A0J9YXS1 232 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 CYFIP1Q7L576 1253 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 PNMA8AQ86V59 439 aaPredicted RBP16■□□□□ 0.15
SYMPK-213ENST00000599460 ZNF668Q96K58 619 aaPredicted RBP16■□□□□ 0.15
SYMPK-213ENST00000599460 CCSER1Q9C0I3 900 aa16■□□□□ 0.15
SYMPK-213ENST00000599460 KIF13AQ9H1H9 1805 aa15.99■□□□□ 0.15
SYMPK-213ENST00000599460 LGALS16A8MUM7 142 aa15.99■□□□□ 0.15
SYMPK-213ENST00000599460 NDC80O14777 642 aa15.99■□□□□ 0.15
SYMPK-213ENST00000599460 MFAP3LO75121 409 aa15.99■□□□□ 0.15
SYMPK-213ENST00000599460 TAF1CQ15572 869 aaPredicted RBP15.99■□□□□ 0.15
SYMPK-213ENST00000599460 NBPF9Q3BBW0 867 aa15.99■□□□□ 0.15
SYMPK-213ENST00000599460 KCNV1Q6PIU1 500 aa15.99■□□□□ 0.15
SYMPK-213ENST00000599460 GRK7Q8WTQ7 553 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms