RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 PIK3AP1Q6ZUJ8 805 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 NEK8Q86SG6 692 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 CCDC83Q8IWF9 413 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 GJA10Q969M2 543 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 TIFAQ96CG3 184 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 TBC1D32Q96NH3 1257 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 SLC9A7Q96T83 725 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 TEKT3Q9BXF9 490 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 OSBPL7Q9BZF2 842 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 KCNMB3Q9NPA1 279 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 DISC1Q9NRI5 854 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 DDX25Q9UHL0 483 aaKnown RBP10.97□□□□□ -0.65
VRK3-215ENST00000599138 TRPC6Q9Y210 931 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 PCDHA2Q9Y5H9 948 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 IGSF9BQ9UPX0 1349 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 COL1A2P08123 1366 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 SIP14410 1827 aa10.97□□□□□ -0.65
VRK3-215ENST00000599138 LOXHD1Q8IVV2 1947 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 FAM205CA6NFA0 338 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 BTBD18B2RXH4 712 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 RBAK-RBAKDNI3L0D1 243 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 EFCAB14O75071 495 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 RPLP2P05387 115 aaKnown RBP10.96□□□□□ -0.65
VRK3-215ENST00000599138 CTSHP09668 335 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 SFNP31947 248 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 JAK3P52333 1124 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 WDR5P61964 334 aaKnown RBP10.96□□□□□ -0.65
VRK3-215ENST00000599138 IGBP1P78318 339 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 LETM2Q2VYF4 491 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 ZNF484Q5JVG2 852 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 LRCH2Q5VUJ6 765 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 MTHFD1LQ6UB35 978 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 DIS3L2Q8IYB7 885 aaKnown RBP10.96□□□□□ -0.65
VRK3-215ENST00000599138 DBF4BQ8NFT6 615 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 RDM1Q8NG50 284 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 TRAPPC12Q8WVT3 735 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 DNAJB3Q8WWF6 145 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 BBXQ8WY36 941 aaPredicted RBP10.96□□□□□ -0.65
VRK3-215ENST00000599138 HAS1Q92839 578 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 ZBTB10Q96DT7 871 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 NAP1L4Q99733 375 aaKnown RBP10.96□□□□□ -0.65
VRK3-215ENST00000599138 UNC45AQ9H3U1 944 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 UPF2Q9HAU5 1272 aaKnown RBP10.96□□□□□ -0.65
VRK3-215ENST00000599138 BRMS1Q9HCU9 246 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 GABBR1Q9UBS5 961 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 TCEAL9Q9UHQ7 104 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 MSRAQ9UJ68 235 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 STXBP5LQ9Y2K9 1186 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 YBX2Q9Y2T7 364 aaKnown RBP10.96□□□□□ -0.65
VRK3-215ENST00000599138 PCDHA11Q9Y5I1 949 aa10.96□□□□□ -0.65
VRK3-215ENST00000599138 TRANK1O15050 2925 aa10.96□□□□□ -0.66
VRK3-215ENST00000599138 TTC28Q96AY4 2481 aa10.96□□□□□ -0.66
VRK3-215ENST00000599138 NCOR1O75376 2440 aa10.96□□□□□ -0.66
VRK3-215ENST00000599138 BRWD1Q9NSI6 2320 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 SMIM35A0A1B0GVV1 85 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 TBX3O15119 743 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 ZNF862O60290 1169 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 RABGGTBP53611 331 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 HMGN5P82970 282 aaKnown RBP10.95□□□□□ -0.66
VRK3-215ENST00000599138 IKBKEQ14164 716 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 RSPH3Q86UC2 560 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 HERC6Q8IVU3 1022 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 FAM167AQ96KS9 214 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 FAM20AQ96MK3 541 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 FAM161BQ96MY7 647 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 CDX2Q99626 313 aaPredicted RBP10.95□□□□□ -0.66
VRK3-215ENST00000599138 ZNF576Q9H609 170 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 VAV3Q9UKW4 847 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 TTC3P53804 2025 aa10.95□□□□□ -0.66
VRK3-215ENST00000599138 PRRC2BQ5JSZ5 2229 aaKnown RBP10.94□□□□□ -0.66
VRK3-215ENST00000599138 KDM3AQ9Y4C1 1321 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 ST18O60284 1047 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 CCNT1O60563 726 aaKnown RBP10.94□□□□□ -0.66
VRK3-215ENST00000599138 STBD1O95210 358 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 CD2BP2O95400 341 aaKnown RBP10.94□□□□□ -0.66
VRK3-215ENST00000599138 C22orf31O95567 290 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 MYOGP15173 224 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 KLRC1P26715 233 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 KCNJ6P48051 423 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 DEFB103AP81534 67 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 MRPS6P82932 125 aaKnown RBP10.94□□□□□ -0.66
VRK3-215ENST00000599138 PPP2R5CQ13362 524 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 TRIM29Q14134 588 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 LPIN1Q14693 890 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 GRIN2CQ14957 1233 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 UGCGQ16739 394 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 FBXO47Q5MNV8 452 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 MIER3Q7Z3K6 550 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 KIAA0319LQ8IZA0 1049 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 NME8Q8N427 588 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 LINC01465Q8N7H1 131 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 FBXO18Q8NFZ0 1043 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 SEPT8Q92599 483 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 C8orf76Q96K31 380 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 FAM49AQ9H0Q0 323 aaPredicted RBP10.94□□□□□ -0.66
VRK3-215ENST00000599138 NKX2-4Q9H2Z4 354 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 SAMM50Q9Y512 469 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 CDY2AQ9Y6F7 541 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 SQORQ9Y6N5 450 aa10.94□□□□□ -0.66
VRK3-215ENST00000599138 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms