RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 GNAT1P11488 350 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 CLCN5P51795 746 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 SP2Q02086 613 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 TRDNQ13061 729 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 PLPP4Q5VZY2 271 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 SYCE2Q6PIF2 218 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 RUFY4Q6ZNE9 571 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 RUFY3Q7L099 469 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 MCF2L2Q86YR7 1114 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 CCDC105Q8IYK2 499 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 POMKQ9H5K3 350 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 ZSWIM5Q9P217 1185 aa15.98■□□□□ 0.15
SHKBP1-218ENST00000598907 PI15O43692 258 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 ANTXR2P58335 489 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 ERVFC1P60507 584 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 APOBRQ0VD83 1088 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 RABEP1Q15276 862 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 UTP14CQ5TAP6 766 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 BLOC1S2Q6QNY1 142 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 CYB5R4Q7L1T6 521 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 DHX32Q7L7V1 743 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 IL31RAQ8NI17 732 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 CYP2W1Q8TAV3 490 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 ESR2Q92731 530 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 MTA3Q9BTC8 594 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 BCAS3Q9H6U6 928 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 EHMT1Q9H9B1 1298 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 CEP250Q9BV73 2442 aa15.97■□□□□ 0.15
SHKBP1-218ENST00000598907 FSD2A1L4K1 749 aa15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 DHX16O60231 1041 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 CPA1P15085 419 aa15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 CD52P31358 61 aa15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 MCM5P33992 734 aa15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 ST3GAL2Q16842 350 aa15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 RALYLQ86SE5 291 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 NPAS4Q8IUM7 802 aa15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 FBXL16Q8N461 479 aa15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 TTC14Q96N46 770 aa15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 CDCA3Q99618 268 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 TCP11L1Q9NUJ3 509 aa15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 CYP46A1Q9Y6A2 500 aa15.96■□□□□ 0.15
SHKBP1-218ENST00000598907 DOCK5Q9H7D0 1870 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 BAHCC1Q9P281 2608 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 WEE2P0C1S8 567 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 AOC1P19801 751 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 SP4Q02446 784 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 MGAT3Q09327 533 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 FBXO47Q5MNV8 452 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 THNSL1Q8IYQ7 743 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 DCLK2Q8N568 766 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 DTWD2Q8NBA8 298 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 PDCD2LQ9BRP1 358 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 AGXT2Q9BYV1 514 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 AGO3Q9H9G7 860 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 HCSTQ9UBK5 93 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 PCDHB12Q9Y5F1 795 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 CDY2AQ9Y6F7 541 aa15.95■□□□□ 0.14
SHKBP1-218ENST00000598907 MYH6P13533 1939 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 PRC1O43663 620 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 FGF18O76093 207 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 SNHG28P0DPA3 235 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 RSPO4Q2I0M5 234 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 QRICH1Q2TAL8 776 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 KCNV1Q6PIU1 500 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 TSHZ1Q6ZSZ6 1077 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 TDRD5Q8NAT2 981 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 IGDCC4Q8TDY8 1250 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 RIN2Q8WYP3 895 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 ENTPD7Q9NQZ7 604 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 TMEM260Q9NX78 707 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 DLL3Q9NYJ7 618 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 LIMD1Q9UGP4 676 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 ZNF215Q9UL58 517 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 LRFN2Q9ULH4 789 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 MRPL11Q9Y3B7 192 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 MYO10Q9HD67 2058 aa15.94■□□□□ 0.14
SHKBP1-218ENST00000598907 MAP1BP46821 2468 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 STAG3L1P0CL83 205 aa15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 SCG2P13521 617 aa15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 HOXA13P31271 388 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 NEK4P51957 841 aa15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 ADAM17P78536 824 aa15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 UBE3AQ05086 875 aa15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 PGM5Q15124 567 aa15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 SEC23AQ15436 765 aa15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 GPATCH4Q5T3I0 446 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 RTN4RL1Q86UN2 441 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 DNAJB3Q8WWF6 145 aa15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 TMEM87BQ96K49 555 aa15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 RALYQ9UKM9 306 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 TELO2Q9Y4R8 837 aa15.93■□□□□ 0.14
SHKBP1-218ENST00000598907 NPR3P17342 541 aa15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 KCNC3Q14003 757 aa15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 TOB2Q14106 344 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 CES5AQ6NT32 575 aa15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 TMEM184AQ6ZMB5 413 aa15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 RSPH3Q86UC2 560 aa15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 ADGRF4Q8IZF3 695 aa15.92■□□□□ 0.14
SHKBP1-218ENST00000598907 TCEANC2Q96MN5 208 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms