RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 CCDC155Q8N6L0 562 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 IGSF22Q8N9C0 903 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 PPP1R13LQ8WUF5 828 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 LMBR1Q8WVP7 490 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 DYDC2Q96IM9 177 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 USP28Q96RU2 1077 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 LXNQ9BS40 222 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 TRPV6Q9H1D0 765 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 ZSWIM4Q9H7M6 989 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 PDLIM7Q9NR12 457 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 TRMT13Q9NUP7 481 aaKnown RBP16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 SETD4Q9NVD3 440 aa16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 MORC2Q9Y6X9 1032 aaPredicted RBP16.93■□□□□ 0.3
GTF2F1-206ENST00000598607 VWA3AA6NCI4 1184 aa16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 ZNF862O60290 1169 aa16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 ATP4AP20648 1035 aa16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 MUTP22033 750 aa16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 NASPP49321 788 aaPredicted RBP16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 CEBPZQ03701 1054 aaKnown RBP16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 PTK7Q13308 1070 aa16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 STK38Q15208 465 aa16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 PTPAQ15257 358 aa16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 POLR3CQ9BUI4 534 aaPredicted RBP16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 TUFT1Q9NNX1 390 aa16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 PRDM5Q9NQX1 630 aaPredicted RBP16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 TSHZ2Q9NRE2 1034 aa16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 CFAP45Q9UL16 551 aa16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 RBM19Q9Y4C8 960 aaKnown RBP16.92■□□□□ 0.3
GTF2F1-206ENST00000598607 KIAA0355O15063 1070 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 SLITRK3O94933 977 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 YEATS4O95619 227 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 RPLP2P05387 115 aaKnown RBP16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 RPA1P27694 616 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 DDIT3P35638 169 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 ADAM17P78536 824 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 CYP4A11Q02928 519 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 BFSP2Q13515 415 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 SLC39A14Q15043 492 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 KRT79Q5XKE5 535 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 OTUD6AQ7L8S5 288 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 TRMT1LQ7Z2T5 733 aaKnown RBP16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 TPH2Q8IWU9 490 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 CAGE1Q8TC20 777 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 AK8Q96MA6 479 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 HSD17B14Q9BPX1 270 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 FTOQ9C0B1 505 aaKnown RBP eCLIP16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 RGL1Q9NZL6 768 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 SEPT9Q9UHD8 586 aaPredicted RBP16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 TUBE1Q9UJT0 475 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 TBX21Q9UL17 535 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 CIZ1Q9ULV3 898 aaPredicted RBP16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 ZDHHC9Q9Y397 364 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 MYH11P35749 1972 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 SCN5AQ14524 2016 aa16.91■□□□□ 0.3
GTF2F1-206ENST00000598607 TREHO43280 583 aa16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 LYPLA2O95372 231 aa16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 RAG1P15918 1043 aa16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 LONP1P36776 959 aaKnown RBP16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 IGBP1P78318 339 aa16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 CTTNQ14247 550 aaKnown RBP16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 IL17AQ16552 155 aa16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 TAF2Q6P1X5 1199 aa16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 SERINC5Q86VE9 423 aa16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 SNX29Q8TEQ0 813 aa16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 NIFKQ9BYG3 293 aaKnown RBP16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 PPME1Q9Y570 386 aa16.9■□□□□ 0.3
GTF2F1-206ENST00000598607 SIP14410 1827 aa16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 MBLAC1A4D2B0 266 aaPredicted RBP16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 DDX11L8A8MPP1 907 aa16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 MAGEB2O15479 319 aa16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 SLC26A4O43511 780 aa16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 CYP2C9P11712 490 aa16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 YWHABP31946 246 aaKnown RBP16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 CCT6AP40227 531 aaKnown RBP16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 ZNF200P98182 395 aaPredicted RBP16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 HIC1Q14526 733 aa16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 FOXD4L6Q3SYB3 417 aaPredicted RBP16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 FOXD4L3Q6VB84 417 aaPredicted RBP16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 SH3RF1Q7Z6J0 888 aa16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 CATSPER3Q86XQ3 398 aa16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 LINC00301Q8NCQ3 95 aa16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 HIPK3Q9H422 1215 aa16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 TFIP11Q9UBB9 837 aaKnown RBP16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 SRPRBQ9Y5M8 271 aaKnown RBP16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 KDM3AQ9Y4C1 1321 aa16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 TNRC18O15417 2968 aaPredicted RBP16.89■□□□□ 0.29
GTF2F1-206ENST00000598607 TRIM43BA6NCK2 446 aa16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 PITPNM1O00562 1244 aa16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 SPTLC2O15270 562 aa16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 CAND2O75155 1236 aa16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 PPP6R2O75170 966 aa16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 MED24O75448 989 aa16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 STBD1O95210 358 aa16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 TIMP1P01033 207 aa16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 SPATA31C1P0DKV0 1188 aa16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 XRCC6P12956 609 aaKnown RBP eCLIP16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 KLRC1P26715 233 aa16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 MARCKSP29966 332 aaPredicted RBP16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 KRT85P78386 507 aa16.88■□□□□ 0.29
GTF2F1-206ENST00000598607 DNM1Q05193 864 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms