RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 SNX21Q969T3 373 aa23.44■■□□□ 1.34
PAF1-207ENST00000598127 VAV3Q9UKW4 847 aa23.44■■□□□ 1.34
PAF1-207ENST00000598127 NEMFO60524 1076 aa23.43■■□□□ 1.34
PAF1-207ENST00000598127 ATP2B1P20020 1258 aa23.43■■□□□ 1.34
PAF1-207ENST00000598127 TRAPPC10P48553 1259 aa23.43■■□□□ 1.34
PAF1-207ENST00000598127 CALCRLQ16602 461 aa23.43■■□□□ 1.34
PAF1-207ENST00000598127 ZNF484Q5JVG2 852 aa23.43■■□□□ 1.34
PAF1-207ENST00000598127 LARP1BQ659C4 914 aaKnown RBP23.43■■□□□ 1.34
PAF1-207ENST00000598127 TRAF7Q6Q0C0 670 aa23.43■■□□□ 1.34
PAF1-207ENST00000598127 DEFB128Q7Z7B8 93 aa23.43■■□□□ 1.34
PAF1-207ENST00000598127 RNPC3Q96LT9 517 aaKnown RBP23.43■■□□□ 1.34
PAF1-207ENST00000598127 COL1A2P08123 1366 aa23.42■■□□□ 1.34
PAF1-207ENST00000598127 RSPH10B2B2RC85 870 aa23.42■■□□□ 1.34
PAF1-207ENST00000598127 H3BQV1 296 aa23.42■■□□□ 1.34
PAF1-207ENST00000598127 K7ELQ4 463 aaPredicted RBP23.42■■□□□ 1.34
PAF1-207ENST00000598127 RSPH10BP0C881 870 aa23.42■■□□□ 1.34
PAF1-207ENST00000598127 FXR1P51114 621 aaKnown RBP eCLIP23.42■■□□□ 1.34
PAF1-207ENST00000598127 ORC2Q13416 577 aaPredicted RBP23.42■■□□□ 1.34
PAF1-207ENST00000598127 GPNMBQ14956 572 aa23.42■■□□□ 1.34
PAF1-207ENST00000598127 HERVK_113Q902F9 699 aa23.42■■□□□ 1.34
PAF1-207ENST00000598127 INTS4Q96HW7 963 aaKnown RBP23.42■■□□□ 1.34
PAF1-207ENST00000598127 FAM167AQ96KS9 214 aa23.42■■□□□ 1.34
PAF1-207ENST00000598127 MTMR9Q96QG7 549 aa23.42■■□□□ 1.34
PAF1-207ENST00000598127 NRBP2Q9NSY0 501 aa23.42■■□□□ 1.34
PAF1-207ENST00000598127 NOL7Q9UMY1 257 aaKnown RBP23.42■■□□□ 1.34
PAF1-207ENST00000598127 PCDHA12Q9UN75 941 aa23.42■■□□□ 1.34
PAF1-207ENST00000598127 PCDHA2Q9Y5H9 948 aa23.42■■□□□ 1.34
PAF1-207ENST00000598127 EML1O00423 815 aa23.41■■□□□ 1.34
PAF1-207ENST00000598127 ZNF862O60290 1169 aa23.41■■□□□ 1.34
PAF1-207ENST00000598127 RPLP2P05387 115 aaKnown RBP23.41■■□□□ 1.34
PAF1-207ENST00000598127 MCM7P33993 719 aa23.41■■□□□ 1.34
PAF1-207ENST00000598127 FAM26DQ5JW98 314 aa23.41■■□□□ 1.34
PAF1-207ENST00000598127 RASIP1Q5U651 963 aa23.41■■□□□ 1.34
PAF1-207ENST00000598127 MTHFD1LQ6UB35 978 aa23.41■■□□□ 1.34
PAF1-207ENST00000598127 RUFY4Q6ZNE9 571 aa23.41■■□□□ 1.34
PAF1-207ENST00000598127 TRAPPC12Q8WVT3 735 aa23.41■■□□□ 1.34
PAF1-207ENST00000598127 ZBTB42B2RXF5 422 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 CXCL10P02778 98 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 KLRC1P26715 233 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 SPIRE1Q08AE8 756 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 EPHA7Q15375 998 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 ZNF174Q15697 407 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 UGCGQ16739 394 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 TTC38Q5R3I4 469 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 MCTP1Q6DN14 999 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 OTOP2Q7RTS6 562 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 TRMT1LQ7Z2T5 733 aaKnown RBP23.4■■□□□ 1.34
PAF1-207ENST00000598127 RSPH3Q86UC2 560 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 FTOQ9C0B1 505 aaKnown RBP eCLIP23.4■■□□□ 1.34
PAF1-207ENST00000598127 MTIF3Q9H2K0 278 aaKnown RBP23.4■■□□□ 1.34
PAF1-207ENST00000598127 CEP131Q9UPN4 1083 aa23.4■■□□□ 1.34
PAF1-207ENST00000598127 LAMA3Q16787 3333 aa23.39■■□□□ 1.34
PAF1-207ENST00000598127 NBNO60934 754 aa23.39■■□□□ 1.33
PAF1-207ENST00000598127 OATP04181 439 aa23.39■■□□□ 1.33
PAF1-207ENST00000598127 P4HBP07237 508 aaKnown RBP23.39■■□□□ 1.33
PAF1-207ENST00000598127 TXKP42681 527 aa23.39■■□□□ 1.33
PAF1-207ENST00000598127 PRKCEQ02156 737 aa23.39■■□□□ 1.33
PAF1-207ENST00000598127 MBTPS1Q14703 1052 aa23.39■■□□□ 1.33
PAF1-207ENST00000598127 DNAJB3Q8WWF6 145 aa23.39■■□□□ 1.33
PAF1-207ENST00000598127 TMEM60Q9H2L4 133 aa23.39■■□□□ 1.33
PAF1-207ENST00000598127 TTC12Q9H892 705 aaPredicted RBP23.39■■□□□ 1.33
PAF1-207ENST00000598127 LOXHD1Q8IVV2 1947 aa23.38■■□□□ 1.33
PAF1-207ENST00000598127 SMIM35A0A1B0GVV1 85 aa23.38■■□□□ 1.33
PAF1-207ENST00000598127 SOX1O00570 391 aaPredicted RBP23.38■■□□□ 1.33
PAF1-207ENST00000598127 ACTN1P12814 892 aa23.38■■□□□ 1.33
PAF1-207ENST00000598127 TOB1P50616 345 aaPredicted RBP23.38■■□□□ 1.33
PAF1-207ENST00000598127 PSMC5P62195 406 aa23.38■■□□□ 1.33
PAF1-207ENST00000598127 ZBTB10Q96DT7 871 aa23.38■■□□□ 1.33
PAF1-207ENST00000598127 DKC1O60832 514 aaKnown RBP eCLIP23.37■■□□□ 1.33
PAF1-207ENST00000598127 STBD1O95210 358 aa23.37■■□□□ 1.33
PAF1-207ENST00000598127 PDCP20941 246 aa23.37■■□□□ 1.33
PAF1-207ENST00000598127 QARSP47897 775 aaKnown RBP23.37■■□□□ 1.33
PAF1-207ENST00000598127 XKR3Q5GH77 459 aa23.37■■□□□ 1.33
PAF1-207ENST00000598127 NCAPH2Q6IBW4 605 aa23.37■■□□□ 1.33
PAF1-207ENST00000598127 NME8Q8N427 588 aa23.37■■□□□ 1.33
PAF1-207ENST00000598127 BANK1Q8NDB2 785 aa23.37■■□□□ 1.33
PAF1-207ENST00000598127 NIFKQ9BYG3 293 aaKnown RBP23.37■■□□□ 1.33
PAF1-207ENST00000598127 LAMA2P24043 3122 aaKnown RBP23.36■■□□□ 1.33
PAF1-207ENST00000598127 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.36■■□□□ 1.33
PAF1-207ENST00000598127 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.36■■□□□ 1.33
PAF1-207ENST00000598127 MAGEB2O15479 319 aa23.36■■□□□ 1.33
PAF1-207ENST00000598127 CHRNA1P02708 482 aa23.36■■□□□ 1.33
PAF1-207ENST00000598127 CTSHP09668 335 aa23.36■■□□□ 1.33
PAF1-207ENST00000598127 FAM49AQ9H0Q0 323 aaPredicted RBP23.36■■□□□ 1.33
PAF1-207ENST00000598127 CXXC1Q9P0U4 656 aaPredicted RBP23.36■■□□□ 1.33
PAF1-207ENST00000598127 C22orf31O95567 290 aa23.35■■□□□ 1.33
PAF1-207ENST00000598127 SMAD3P84022 425 aaKnown RBP23.35■■□□□ 1.33
PAF1-207ENST00000598127 MGAT3Q09327 533 aa23.35■■□□□ 1.33
PAF1-207ENST00000598127 TARBP2Q15633 366 aaKnown RBP23.35■■□□□ 1.33
PAF1-207ENST00000598127 RILPL1Q5EBL4 403 aa23.35■■□□□ 1.33
PAF1-207ENST00000598127 IER5Q5VY09 327 aa23.35■■□□□ 1.33
PAF1-207ENST00000598127 CNKSR3Q6P9H4 555 aa23.35■■□□□ 1.33
PAF1-207ENST00000598127 HSCBQ8IWL3 235 aa23.35■■□□□ 1.33
PAF1-207ENST00000598127 C4orf32Q8N8J7 132 aa23.35■■□□□ 1.33
PAF1-207ENST00000598127 LRCH3Q96II8 777 aa23.35■■□□□ 1.33
PAF1-207ENST00000598127 SIP14410 1827 aa23.34■■□□□ 1.33
PAF1-207ENST00000598127 DDX11L8A8MPP1 907 aa23.34■■□□□ 1.33
PAF1-207ENST00000598127 BAIAP3O94812 1187 aa23.34■■□□□ 1.33
PAF1-207ENST00000598127 OR52Z1P0C646 297 aa23.34■■□□□ 1.33
PAF1-207ENST00000598127 MRPS6P82932 125 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms