RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 SLC37A4O43826 429 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 B4GALT4O60513 344 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 NR3C2P08235 984 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 PFKMP08237 780 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 OR52Z1P0C646 297 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 CYP3A7P24462 503 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 ATP2C1P98194 919 aaPredicted RBP13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 PTGDRQ13258 359 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 STXBP2Q15833 593 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 Q4G0T1 1027 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 CEP55Q53EZ4 464 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 PRR16Q569H4 304 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 HERC4Q5GLZ8 1057 aaPredicted RBP13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 MAMDC4Q6UXC1 1216 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 NIPA1Q7RTP0 329 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 HERC6Q8IVU3 1022 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 MSL3Q8N5Y2 521 aaKnown RBP13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 LINC00301Q8NCQ3 95 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 PRKAG3Q9UGI9 489 aa13.59□□□□□ -0.23
SHKBP1-213ENST00000597325 BAHCC1Q9P281 2608 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 FAM86B1E9PN63 330 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 PPP6R2O75170 966 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 FAM86B2P0C5J1 330 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 PTMSP20962 102 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 MARCKSP29966 332 aaPredicted RBP13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 IRS1P35568 1242 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 MTMR1Q13613 665 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 PTPAQ15257 358 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 TMEM266Q2M3C6 531 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 GNPTABQ3T906 1256 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 GNASQ5JWF2 1037 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 ZNF467Q7Z7K2 595 aaPredicted RBP13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 NLRX1Q86UT6 975 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 PLA2G4DQ86XP0 818 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 KRI1Q8N9T8 703 aaKnown RBP13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 TMEM87AQ8NBN3 555 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 MBOAT7Q96N66 472 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 MXRA8Q9BRK3 442 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 TRPV6Q9H1D0 765 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 RCOR1Q9UKL0 485 aa13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 MORC2Q9Y6X9 1032 aaPredicted RBP13.58□□□□□ -0.24
SHKBP1-213ENST00000597325 LCHNA4D1U4 455 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 EDNRBP24530 442 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 PRPHP41219 470 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 MRPS9P82933 396 aaKnown RBP13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 ARL6IP4Q66PJ3 421 aaKnown RBP13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 VSIG10LQ86VR7 867 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 ADHFE1Q8IWW8 467 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 SLFN12Q8IYM2 578 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 GPRASP2Q96D09 838 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 CDHR1Q96JP9 859 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 SUGCTQ9HAC7 445 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 JADE2Q9NQC1 790 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 TCEAL9Q9UHQ7 104 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 ZHX1Q9UKY1 873 aaPredicted RBP13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 UBIAD1Q9Y5Z9 338 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 ASTN1O14525 1302 aa13.57□□□□□ -0.24
SHKBP1-213ENST00000597325 IGLV3-22A0A075B6J6 115 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 PROB1E7EW31 1015 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 TBX3O15119 743 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 EDIL3O43854 480 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 CUTAO60888 179 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 MCM4P33991 863 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 ITGA7Q13683 1181 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 DTHD1Q6ZMT9 781 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 ARMCX2Q7L311 632 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 LENG9Q96B70 501 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 ZFP91Q96JP5 570 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 FGD4Q96M96 766 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 FAM20AQ96MK3 541 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 ZNF577Q9BSK1 485 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 RAB34Q9BZG1 259 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 TMEM60Q9H2L4 133 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 SPC25Q9HBM1 224 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 MUTYHQ9UIF7 546 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 FBXO2Q9UK22 296 aaPredicted RBP13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 GVINP1Q7Z2Y8 2422 aa13.56□□□□□ -0.24
SHKBP1-213ENST00000597325 TET1Q8NFU7 2136 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 TCHHQ07283 1943 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 CHD6Q8TD26 2715 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 VWA3AA6NCI4 1184 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 H3BQ06 376 aaPredicted RBP13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 MEIS1O00470 390 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 PRPF40AO75400 957 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 ITGB5P18084 799 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 TXKP42681 527 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 ACVR2BQ13705 512 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 CCDC144BQ3MJ40 725 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 ASCL5Q7RTU5 278 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 DEFB128Q7Z7B8 93 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 C4orf32Q8N8J7 132 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 CYP2W1Q8TAV3 490 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 ETNPPLQ8TBG4 499 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 MORC4Q8TE76 937 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 EDAQ92838 391 aa13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 INPP4AQ96PE3 977 aaPredicted RBP13.55□□□□□ -0.24
SHKBP1-213ENST00000597325 SEZ6LQ9BYH1 1024 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms