RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 CAGE1Q8TC20 777 aa17.33■□□□□ 0.36
USE1-206ENST00000595101 ATP8B4Q8TF62 1192 aa17.33■□□□□ 0.36
USE1-206ENST00000595101 NAP1L4Q99733 375 aaKnown RBP17.33■□□□□ 0.36
USE1-206ENST00000595101 WRAP73Q9P2S5 460 aaPredicted RBP17.33■□□□□ 0.36
USE1-206ENST00000595101 TUBE1Q9UJT0 475 aa17.33■□□□□ 0.36
USE1-206ENST00000595101 KIF3AQ9Y496 699 aa17.33■□□□□ 0.36
USE1-206ENST00000595101 PCDHB6Q9Y5E3 794 aa17.33■□□□□ 0.36
USE1-206ENST00000595101 CDH23Q9H251 3354 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 MBLAC1A4D2B0 266 aaPredicted RBP17.32■□□□□ 0.36
USE1-206ENST00000595101 TBX3O15119 743 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 NBNO60934 754 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 CTSHP09668 335 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 SELPP16109 830 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 SFNP31947 248 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 TXKP42681 527 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 JAK3P52333 1124 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 RBL2Q08999 1139 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 PPIGQ13427 754 aaKnown RBP eCLIP17.32■□□□□ 0.368e-6■■■■□ 22.7
USE1-206ENST00000595101 TCTN1Q2MV58 587 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 TTC38Q5R3I4 469 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 LRRC8DQ7L1W4 858 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 IL23AQ9NPF7 189 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 RGL1Q9NZL6 768 aa17.32■□□□□ 0.36
USE1-206ENST00000595101 GNAT1P11488 350 aa17.31■□□□□ 0.36
USE1-206ENST00000595101 PRKCEQ02156 737 aa17.31■□□□□ 0.36
USE1-206ENST00000595101 NCAPH2Q6IBW4 605 aa17.31■□□□□ 0.36
USE1-206ENST00000595101 OTOP2Q7RTS6 562 aa17.31■□□□□ 0.36
USE1-206ENST00000595101 C4orf32Q8N8J7 132 aa17.31■□□□□ 0.36
USE1-206ENST00000595101 DNAJB3Q8WWF6 145 aa17.31■□□□□ 0.36
USE1-206ENST00000595101 TTC12Q9H892 705 aaPredicted RBP17.31■□□□□ 0.36
USE1-206ENST00000595101 CXXC1Q9P0U4 656 aaPredicted RBP17.31■□□□□ 0.36
USE1-206ENST00000595101 HBP1O60381 514 aa17.3■□□□□ 0.36
USE1-206ENST00000595101 STBD1O95210 358 aa17.3■□□□□ 0.36
USE1-206ENST00000595101 KLRC1P26715 233 aa17.3■□□□□ 0.36
USE1-206ENST00000595101 SLC26A2P50443 739 aa17.3■□□□□ 0.36
USE1-206ENST00000595101 MTHFD1LQ6UB35 978 aa17.3■□□□□ 0.36
USE1-206ENST00000595101 SPRYD3Q8NCJ5 442 aa17.3■□□□□ 0.36
USE1-206ENST00000595101 LRCH3Q96II8 777 aa17.3■□□□□ 0.36
USE1-206ENST00000595101 FAM49AQ9H0Q0 323 aaPredicted RBP17.3■□□□□ 0.36
USE1-206ENST00000595101 PCDHA12Q9UN75 941 aa17.3■□□□□ 0.36
USE1-206ENST00000595101 ZBTB39O15060 712 aa17.3■□□□□ 0.36
USE1-206ENST00000595101 FXR1P51114 621 aaKnown RBP eCLIP17.3■□□□□ 0.36
USE1-206ENST00000595101 FAM109BQ6ICB4 259 aaPredicted RBP17.3■□□□□ 0.36
USE1-206ENST00000595101 FERMT3Q86UX7 667 aa17.3■□□□□ 0.36
USE1-206ENST00000595101 SLFN12Q8IYM2 578 aa17.3■□□□□ 0.36
USE1-206ENST00000595101 INTS4Q96HW7 963 aaKnown RBP17.3■□□□□ 0.36
USE1-206ENST00000595101 VPS37CA5D8V6 355 aaPredicted RBP17.29■□□□□ 0.36
USE1-206ENST00000595101 POTEMA6NI47 508 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 RRN3P2A6NIE6 340 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 RSPH10B2B2RC85 870 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 BAG4O95429 457 aaKnown RBP17.29■□□□□ 0.36
USE1-206ENST00000595101 CHRNA1P02708 482 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 OATP04181 439 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 RSPH10BP0C881 870 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 SYT1P21579 422 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 TMEM62Q0P6H9 643 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 CCDC155Q8N6L0 562 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 RDM1Q8NG50 284 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 BBXQ8WY36 941 aaPredicted RBP17.29■□□□□ 0.36
USE1-206ENST00000595101 DYDC2Q96IM9 177 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 RNPC3Q96LT9 517 aaKnown RBP17.29■□□□□ 0.36
USE1-206ENST00000595101 SCN5AQ14524 2016 aa17.29■□□□□ 0.36
USE1-206ENST00000595101 A0A087WWV3 80 aa17.28■□□□□ 0.36
USE1-206ENST00000595101 A0A1W2PPC1 479 aa17.28■□□□□ 0.36
USE1-206ENST00000595101 FGBP02675 491 aa17.28■□□□□ 0.36
USE1-206ENST00000595101 CYP4A11Q02928 519 aa17.28■□□□□ 0.36
USE1-206ENST00000595101 CTTNQ14247 550 aaKnown RBP17.28■□□□□ 0.36
USE1-206ENST00000595101 HSCBQ8IWL3 235 aa17.28■□□□□ 0.36
USE1-206ENST00000595101 ZNF579Q8NAF0 562 aaKnown RBP17.28■□□□□ 0.36
USE1-206ENST00000595101 C22orf31O95567 290 aa17.28■□□□□ 0.36
USE1-206ENST00000595101 TECP42680 631 aa17.28■□□□□ 0.36
USE1-206ENST00000595101 TRAPPC10P48553 1259 aa17.28■□□□□ 0.36
USE1-206ENST00000595101 EPHA7Q15375 998 aa17.28■□□□□ 0.36
USE1-206ENST00000595101 ANO5Q75V66 913 aa17.28■□□□□ 0.36
USE1-206ENST00000595101 FTOQ9C0B1 505 aaKnown RBP eCLIP17.28■□□□□ 0.36
USE1-206ENST00000595101 NOL7Q9UMY1 257 aaKnown RBP17.28■□□□□ 0.36
USE1-206ENST00000595101 TET1Q8NFU7 2136 aa17.27■□□□□ 0.36
USE1-206ENST00000595101 GRXCR1A8MXD5 290 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 SLITRK3O94933 977 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 OR52Z1P0C646 297 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 PSMC5P62195 406 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 PTGDRQ13258 359 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 IL17AQ16552 155 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 LRIT3Q3SXY7 679 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 ZNF484Q5JVG2 852 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 RASIP1Q5U651 963 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 PLA2G4FQ68DD2 849 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 TAF2Q6P1X5 1199 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 RPUSD2Q8IZ73 545 aaKnown RBP17.27■□□□□ 0.35
USE1-206ENST00000595101 KIAA0319LQ8IZA0 1049 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 CEP89Q96ST8 783 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 PPP1R16BQ96T49 567 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 EIF2AK1Q9BQI3 630 aaKnown RBP17.27■□□□□ 0.35
USE1-206ENST00000595101 LXNQ9BS40 222 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 PCDHA2Q9Y5H9 948 aa17.27■□□□□ 0.35
USE1-206ENST00000595101 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
USE1-206ENST00000595101 P4HBP07237 508 aaKnown RBP17.26■□□□□ 0.35
USE1-206ENST00000595101 QARSP47897 775 aaKnown RBP17.26■□□□□ 0.35
USE1-206ENST00000595101 NPEPPSP55786 919 aa17.26■□□□□ 0.35
USE1-206ENST00000595101 MGAT3Q09327 533 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms