RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 FKBP15Q5T1M5 1219 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 KCNV1Q6PIU1 500 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 CCDC125Q86Z20 511 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 PRPF38AQ8NAV1 312 aaKnown RBP18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 RHOXF2Q9BQY4 288 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 BHMT2Q9H2M3 363 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 PLEKHA4Q9H4M7 779 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 AGPAT5Q9NUQ2 364 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 PCDHA2Q9Y5H9 948 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 FAM169AQ9Y6X4 670 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 ZNF536O15090 1300 aa18.76■□□□□ 0.59
SHKBP1-205ENST00000594973 ATXN2Q99700 1313 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-205ENST00000594973 NFIBO00712 420 aa18.76■□□□□ 0.59
SHKBP1-205ENST00000594973 SLC26A4O43511 780 aa18.76■□□□□ 0.59
SHKBP1-205ENST00000594973 LRRC55Q6ZSA7 311 aa18.76■□□□□ 0.59
SHKBP1-205ENST00000594973 OTOP1Q7RTM1 612 aa18.76■□□□□ 0.59
SHKBP1-205ENST00000594973 OR8K1Q8NGG5 319 aa18.76■□□□□ 0.59
SHKBP1-205ENST00000594973 EHMT1Q9H9B1 1298 aa18.76■□□□□ 0.59
SHKBP1-205ENST00000594973 CAPN11Q9UMQ6 739 aa18.76■□□□□ 0.59
SHKBP1-205ENST00000594973 CD2APQ9Y5K6 639 aa18.76■□□□□ 0.59
SHKBP1-205ENST00000594973 FZD9O00144 591 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 TRAF5O00463 557 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 WDR46O15213 610 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 CTNND1O60716 968 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 FLOT1O75955 427 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 FGFR1OPO95684 399 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 FECHP22830 423 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 LIG3P49916 1009 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 TPH2Q8IWU9 490 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 SYT2Q8N9I0 419 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 NLGN2Q8NFZ4 835 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 PIGOQ8TEQ8 1089 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 REEP2Q9BRK0 252 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 RAVER2Q9HCJ3 691 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 ZNF541Q9H0D2 1346 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 BRCA1P38398 1863 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 RASSF10A6NK89 507 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 ALAS1P13196 640 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 GIT2Q14161 759 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 TSR1Q2NL82 804 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 VWA3BQ502W6 1294 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 SCFD1Q8WVM8 642 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 LPAR1Q92633 364 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 ZNF577Q9BSK1 485 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 KIAA1683Q9H0B3 1180 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 NDST4Q9H3R1 872 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 MYO1AQ9UBC5 1043 aa18.75■□□□□ 0.59
SHKBP1-205ENST00000594973 GAS7O60861 476 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 PSMD10O75832 226 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 ARP10275 920 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 ZNF569Q5MCW4 686 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 ZKSCAN4Q969J2 545 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 DNAJC7Q99615 494 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 SGIP1Q9BQI5 828 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 EMILIN3Q9NT22 766 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 PKD2L1Q9P0L9 805 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 VCAM1P19320 739 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 CASP5P51878 434 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 ZCWPW2Q504Y3 356 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 DYDC2Q96IM9 177 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 NAPGQ99747 312 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 POLR3CQ9BUI4 534 aaPredicted RBP18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 COL20A1Q9P218 1284 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 HPCAL4Q9UM19 191 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 RABGAP1Q9Y3P9 1069 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 STK24Q9Y6E0 443 aa18.74■□□□□ 0.59
SHKBP1-205ENST00000594973 PITPNM2Q9BZ72 1349 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 RSPH10B2B2RC85 870 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 ZBTB39O15060 712 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 RSPH10BP0C881 870 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 FKBP3Q00688 224 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 SPP2Q13103 211 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 ANGEL2Q5VTE6 544 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 SLC5A5Q92911 643 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 HSD17B14Q9BPX1 270 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 RUSC1Q9BVN2 902 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 TTYH3Q9C0H2 523 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 BCAS3Q9H6U6 928 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 FAM207AQ9NSI2 230 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 FRMD3A2A2Y4 597 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 MAN2A1Q16706 1144 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 WDR59Q6PJI9 974 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 SFR1Q86XK3 245 aa18.73■□□□□ 0.59
SHKBP1-205ENST00000594973 LTBP3Q9NS15 1303 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 DDX39AO00148 427 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 SLITRK3O94933 977 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 ABL1P00519 1130 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 HOXA7P31268 230 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 CCT5P48643 541 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 HSD17B4P51659 736 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 CCDC40Q4G0X9 1142 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 GBP6Q6ZN66 633 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 FAM76AQ8TAV0 307 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 CLEC4DQ8WXI8 215 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 ERGIC2Q96RQ1 377 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 NUP58Q9BVL2 599 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 RPAP3Q9H6T3 665 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 COL4A3BPQ9Y5P4 624 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 ATAD5Q96QE3 1844 aa18.72■□□□□ 0.59
SHKBP1-205ENST00000594973 ZC3H4Q9UPT8 1303 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms