RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 LRCH2Q5VUJ6 765 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.69■□□□□ 0.26
USE1-205ENST00000594724 RPAINQ86UA6 219 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 RSPH3Q86UC2 560 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 CCDC83Q8IWF9 413 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 CKAP2LQ8IYA6 745 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 SMAP1Q8IYB5 467 aaPredicted RBP16.69■□□□□ 0.26
USE1-205ENST00000594724 ATP8B4Q8TF62 1192 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 RIT2Q99578 217 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 UNC45AQ9H3U1 944 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 PRDM12Q9H4Q4 367 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 DISC1Q9NRI5 854 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 GABBR1Q9UBS5 961 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 MAFBQ9Y5Q3 323 aaPredicted RBP16.69■□□□□ 0.26
USE1-205ENST00000594724 GBF1Q92538 1859 aa16.69■□□□□ 0.26
USE1-205ENST00000594724 FAM205CA6NFA0 338 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 SLC37A4O43826 429 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 PSMD10O75832 226 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 CA3P07451 260 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 KLRC1P26715 233 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 MGAT3Q09327 533 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 TMEM62Q0P6H9 643 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 NR5A1Q13285 461 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 PPP2R2DQ66LE6 453 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 FAM117BQ6P1L5 589 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 MTHFD1LQ6UB35 978 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 SEPT8Q92599 483 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 MBOAT7Q96N66 472 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 TEKT3Q9BXF9 490 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 DDX25Q9UHL0 483 aaKnown RBP16.68■□□□□ 0.26
USE1-205ENST00000594724 PCDHA2Q9Y5H9 948 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 CDY2AQ9Y6F7 541 aa16.68■□□□□ 0.26
USE1-205ENST00000594724 WDR64B1ANS9 1081 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 KIF28PB7ZC32 967 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 TLL1O43897 1013 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 EFCAB14O75071 495 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 ARHGEF15O94989 841 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 GHRP10912 638 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 FOSL2P15408 326 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 KRT2P35908 639 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 RBM25P49756 843 aaKnown RBP16.67■□□□□ 0.26
USE1-205ENST00000594724 MOXD1Q6UVY6 613 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 NEK8Q86SG6 692 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 ETNPPLQ8TBG4 499 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 ZBED2Q9BTP6 218 aa16.67■□□□□ 0.26
USE1-205ENST00000594724 ZBTB42B2RXF5 422 aa16.66■□□□□ 0.26
USE1-205ENST00000594724 BTBD18B2RXH4 712 aa16.66■□□□□ 0.26
USE1-205ENST00000594724 CCNT1O60563 726 aaKnown RBP16.66■□□□□ 0.26
USE1-205ENST00000594724 MRPS6P82932 125 aaKnown RBP16.66■□□□□ 0.26
USE1-205ENST00000594724 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
USE1-205ENST00000594724 LPIN1Q14693 890 aa16.66■□□□□ 0.26
USE1-205ENST00000594724 UGCGQ16739 394 aa16.66■□□□□ 0.26
USE1-205ENST00000594724 ZNF484Q5JVG2 852 aa16.66■□□□□ 0.26
USE1-205ENST00000594724 FBXO47Q5MNV8 452 aa16.66■□□□□ 0.26
USE1-205ENST00000594724 KRT40Q6A162 431 aa16.66■□□□□ 0.26
USE1-205ENST00000594724 MIER3Q7Z3K6 550 aa16.66■□□□□ 0.26
USE1-205ENST00000594724 MYOCDQ8IZQ8 938 aa16.66■□□□□ 0.26
USE1-205ENST00000594724 BBXQ8WY36 941 aaPredicted RBP16.66■□□□□ 0.26
USE1-205ENST00000594724 TNFRSF25Q93038 417 aa16.66■□□□□ 0.26
USE1-205ENST00000594724 IFIH1Q9BYX4 1025 aaKnown RBP16.66■□□□□ 0.26
USE1-205ENST00000594724 CERS4Q9HA82 394 aa16.66■□□□□ 0.26
USE1-205ENST00000594724 CDH23Q9H251 3354 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 PTPRSQ13332 1948 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 SMIM35A0A1B0GVV1 85 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.65■□□□□ 0.26
USE1-205ENST00000594724 LCHNA4D1U4 455 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 ZNF862O60290 1169 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 MMP1P03956 469 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 SFNP31947 248 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 GUCY1B3Q02153 619 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 TRIM29Q14134 588 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 IER5Q5VY09 327 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 PPP4R3AQ6IN85 833 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 MAFAQ8NHW3 353 aaPredicted RBP16.65■□□□□ 0.26
USE1-205ENST00000594724 ZSCAN31Q96LW9 406 aaPredicted RBP16.65■□□□□ 0.26
USE1-205ENST00000594724 BRMS1Q9HCU9 246 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 IGSF9BQ9UPX0 1349 aa16.65■□□□□ 0.26
USE1-205ENST00000594724 COL1A2P08123 1366 aa16.64■□□□□ 0.26
USE1-205ENST00000594724 CHD9Q3L8U1 2897 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 RFXAPO00287 272 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 UPP2O95045 317 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 GJB5O95377 273 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 AMHP03971 560 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 JAK3P52333 1124 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 TAP1Q03518 808 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 B3GNT9Q6UX72 402 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 SPRED2Q7Z698 418 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 DIS3L2Q8IYB7 885 aaKnown RBP16.64■□□□□ 0.25
USE1-205ENST00000594724 KIAA0319LQ8IZA0 1049 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 SLC17A8Q8NDX2 589 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 APBB2Q92870 758 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 GAS2L1Q99501 681 aaPredicted RBP16.64■□□□□ 0.25
USE1-205ENST00000594724 AGO3Q9H9G7 860 aaKnown RBP16.64■□□□□ 0.25
USE1-205ENST00000594724 KCNMB3Q9NPA1 279 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 NRBP2Q9NSY0 501 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 TRPV2Q9Y5S1 764 aa16.64■□□□□ 0.25
USE1-205ENST00000594724 M0QZ92 97 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 EML1O00423 815 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 C22orf31O95567 290 aa16.63■□□□□ 0.25
USE1-205ENST00000594724 OATP04181 439 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms