RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 WRAP73Q9P2S5 460 aaPredicted RBP12.13□□□□□ -0.47
USE1-204ENST00000594399 STK17AQ9UEE5 414 aa12.13□□□□□ -0.47
USE1-204ENST00000594399 MAFBQ9Y5Q3 323 aaPredicted RBP12.13□□□□□ -0.47
USE1-204ENST00000594399 WDR81Q562E7 1941 aa12.13□□□□□ -0.47
USE1-204ENST00000594399 LOXHD1Q8IVV2 1947 aa12.13□□□□□ -0.47
USE1-204ENST00000594399 CTAGE5O15320 804 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 TNRC18O15417 2968 aaPredicted RBP12.12□□□□□ -0.47
USE1-204ENST00000594399 ZNF862O60290 1169 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 KPNA6O60684 536 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 F2P00734 622 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 MYL3P08590 195 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 EN2P19622 333 aaPredicted RBP12.12□□□□□ -0.47
USE1-204ENST00000594399 SLC26A2P50443 739 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 IRX5P78411 483 aaPredicted RBP12.12□□□□□ -0.47
USE1-204ENST00000594399 SNW1Q13573 536 aaKnown RBP12.12□□□□□ -0.47
USE1-204ENST00000594399 E2F4Q16254 413 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 GNASQ5JWF2 1037 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 LHX8Q68G74 356 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 RNF180Q86T96 592 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 CKAP2LQ8IYA6 745 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 CEP57L1Q8IYX8 460 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 GPT2Q8TD30 523 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 LARP4BQ92615 738 aaKnown RBP12.12□□□□□ -0.47
USE1-204ENST00000594399 FAM167AQ96KS9 214 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 CCDC43Q96MW1 224 aaKnown RBP12.12□□□□□ -0.47
USE1-204ENST00000594399 NACC1Q96RE7 527 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 PLIN2Q99541 437 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 C16orf70Q9BSU1 422 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 PANK2Q9BZ23 570 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 RNF208Q9H0X6 261 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 CUEDC2Q9H467 287 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 MAGEF1Q9HAY2 307 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 ERAP1Q9NZ08 941 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 SEPT9Q9UHD8 586 aaPredicted RBP12.12□□□□□ -0.47
USE1-204ENST00000594399 USP25Q9UHP3 1055 aa12.12□□□□□ -0.47
USE1-204ENST00000594399 ARID2Q68CP9 1835 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 ACTN4O43707 911 aaKnown RBP12.11□□□□□ -0.47
USE1-204ENST00000594399 ZNF202O95125 648 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 OATP04181 439 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
USE1-204ENST00000594399 MARK3P27448 753 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 YWHABP31946 246 aaKnown RBP12.11□□□□□ -0.47
USE1-204ENST00000594399 NAALADL2Q58DX5 795 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 XKR3Q5GH77 459 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 KCNK18Q7Z418 384 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 PCSK9Q8NBP7 692 aaKnown RBP12.11□□□□□ -0.47
USE1-204ENST00000594399 KLHDC9Q8NEP7 349 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 RAD54LQ92698 747 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 CCDC34Q96HJ3 373 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 KATNAL1Q9BW62 490 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 BLOC1S4Q9NUP1 217 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 DACT1Q9NYF0 836 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 DNM3Q9UQ16 869 aa12.11□□□□□ -0.47
USE1-204ENST00000594399 ARHGEF35A5YM69 484 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 E9PMD0 336 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 H3BRB1 525 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 EYA4O95677 639 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 GJB1P08034 283 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 SLFN14P0C7P3 912 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 CAPN2P17655 700 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 PSMC6P62333 389 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 PURAQ00577 322 aaKnown RBP12.1□□□□□ -0.47
USE1-204ENST00000594399 PLCB4Q15147 1175 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 LRRC41Q15345 812 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 KLHL40Q2TBA0 621 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 LONRF3Q496Y0 759 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 PLA2G4FQ68DD2 849 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 KRBA2Q6ZNG9 492 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 ANO5Q75V66 913 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 OTUD6AQ7L8S5 288 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 CNNM3Q8NE01 707 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 PIGOQ8TEQ8 1089 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 ATP8B4Q8TF62 1192 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 LRRC15Q8TF66 581 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
USE1-204ENST00000594399 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 DEFB118Q96PH6 123 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 MTG1Q9BT17 334 aaPredicted RBP12.1□□□□□ -0.47
USE1-204ENST00000594399 TNMDQ9H2S6 317 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 TUT1Q9H6E5 874 aaKnown RBP12.1□□□□□ -0.47
USE1-204ENST00000594399 ANKEF1Q9NU02 776 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 SERTAD1Q9UHV2 236 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 DBR1Q9UK59 544 aaKnown RBP12.1□□□□□ -0.47
USE1-204ENST00000594399 TRPC6Q9Y210 931 aa12.1□□□□□ -0.47
USE1-204ENST00000594399 MYH9P35579 1960 aaKnown RBP12.1□□□□□ -0.47
USE1-204ENST00000594399 MOXD2PA6NHM9 499 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 KBTBD13C9JR72 458 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 STBD1O95210 358 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 SSBP05455 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
USE1-204ENST00000594399 ASGR1P07306 291 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 PLA2G4BP0C869 781 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 XRCC6P12956 609 aaKnown RBP eCLIP12.09□□□□□ -0.47
USE1-204ENST00000594399 ATP4AP20648 1035 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 MCM6Q14566 821 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 MFSD10Q14728 455 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 KCNA10Q16322 511 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 SKOR2Q2VWA4 1001 aaPredicted RBP12.09□□□□□ -0.47
USE1-204ENST00000594399 XKR9Q5GH70 373 aa12.09□□□□□ -0.47
USE1-204ENST00000594399 CCSAPQ6IQ19 270 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms