RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ARHGEF35A5YM69 484 aa16.87■□□□□ 0.29
VRK3-207ENST00000594092 ZNF862O60290 1169 aa16.87■□□□□ 0.29
VRK3-207ENST00000594092 YWHABP31946 246 aaKnown RBP16.87■□□□□ 0.29
VRK3-207ENST00000594092 TTLL4Q14679 1199 aa16.87■□□□□ 0.29
VRK3-207ENST00000594092 CELF3Q5SZQ8 465 aaKnown RBP16.87■□□□□ 0.29
VRK3-207ENST00000594092 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
VRK3-207ENST00000594092 KIAA0895Q8NCT3 520 aa16.87■□□□□ 0.29
VRK3-207ENST00000594092 USP6NLQ92738 828 aa16.87■□□□□ 0.29
VRK3-207ENST00000594092 ATP6V0A1Q93050 837 aa16.87■□□□□ 0.29
VRK3-207ENST00000594092 TINF2Q9BSI4 451 aa16.87■□□□□ 0.29
VRK3-207ENST00000594092 MLXIPQ9HAP2 919 aa16.87■□□□□ 0.29
VRK3-207ENST00000594092 SLC39A2Q9NP94 309 aa16.87■□□□□ 0.29
VRK3-207ENST00000594092 CTNND2Q9UQB3 1225 aa16.87■□□□□ 0.29
VRK3-207ENST00000594092 MAPK8IP1Q9UQF2 711 aa16.87■□□□□ 0.29
VRK3-207ENST00000594092 GSTTP1A0A1W2PQM5 241 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 RBM47A0AV96 593 aaKnown RBP16.86■□□□□ 0.29
VRK3-207ENST00000594092 HOXC6P09630 235 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 TXNP10599 105 aaKnown RBP16.86■□□□□ 0.29
VRK3-207ENST00000594092 RARRES1P49788 294 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 ZNF75DP51815 510 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 PSMD2Q13200 908 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 COBLL1Q53SF7 1204 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 HSD3B7Q9H2F3 369 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 KCND2Q9NZV8 630 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 IGSF9BQ9UPX0 1349 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 IGKV6D-21A0A0A0MT36 114 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 TMEM150BA6NC51 233 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 BACH1O14867 736 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 DKC1O60832 514 aaKnown RBP eCLIP16.86■□□□□ 0.296e-11■■■■■ 26.8
VRK3-207ENST00000594092 STBD1O95210 358 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 PTMAP06454 111 aaKnown RBP16.86■□□□□ 0.29
VRK3-207ENST00000594092 CTGFP29279 349 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 STX17P56962 302 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 PAK1Q13153 545 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 TMEM63BQ5T3F8 832 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 MSL3Q8N5Y2 521 aaKnown RBP16.86■□□□□ 0.29
VRK3-207ENST00000594092 COPS5Q92905 334 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 ANKEF1Q9NU02 776 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 GJD2Q9UKL4 321 aa16.86■□□□□ 0.29
VRK3-207ENST00000594092 SYNRGQ9UMZ2 1314 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 RSPH10B2B2RC85 870 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 TNPO2O14787 897 aaKnown RBP16.85■□□□□ 0.29
VRK3-207ENST00000594092 RSPH10BP0C881 870 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 STIM1Q13586 685 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 HS1BP3Q53T59 392 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 HERC4Q5GLZ8 1057 aaPredicted RBP16.85■□□□□ 0.29
VRK3-207ENST00000594092 FAM26FQ5R3K3 315 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 UTP14CQ5TAP6 766 aaKnown RBP16.85■□□□□ 0.29
VRK3-207ENST00000594092 PADI6Q6TGC4 694 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 ANO5Q75V66 913 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 TRMT1LQ7Z2T5 733 aaKnown RBP16.85■□□□□ 0.29
VRK3-207ENST00000594092 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.85■□□□□ 0.29
VRK3-207ENST00000594092 DHX37Q8IY37 1157 aaKnown RBP16.85■□□□□ 0.29
VRK3-207ENST00000594092 NELFBQ8WX92 580 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 SEPT1Q8WYJ6 367 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 ZNF302Q9NR11 478 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 RWDD2AQ9UIY3 292 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 PCDHA2Q9Y5H9 948 aa16.85■□□□□ 0.29
VRK3-207ENST00000594092 GUCY2CP25092 1073 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 PRKCEQ02156 737 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 SPATA1Q5VX52 437 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 PLA2G4FQ68DD2 849 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 SOCS4Q8WXH5 440 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 PCYT2Q99447 389 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 GPR20Q99678 358 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 ZHX3Q9H4I2 956 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 POLD4Q9HCU8 107 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 FANCLQ9NW38 375 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 FLRT1Q9NZU1 646 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 NFE2L3Q9Y4A8 694 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 MAFBQ9Y5Q3 323 aaPredicted RBP16.84■□□□□ 0.29
VRK3-207ENST00000594092 PSMA7O14818 248 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 TBCAO75347 108 aaKnown RBP16.84■□□□□ 0.29
VRK3-207ENST00000594092 RGS2P41220 211 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 PPP1R2P41236 205 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 NPEPPSP55786 919 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 HSDL1Q3SXM5 330 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 GLIS3Q8NEA6 775 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 DHTKD1Q96HY7 919 aaPredicted RBP16.84■□□□□ 0.29
VRK3-207ENST00000594092 CCDC43Q96MW1 224 aaKnown RBP16.84■□□□□ 0.29
VRK3-207ENST00000594092 SPATA33Q96N06 139 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 SH2D3AQ9BRG2 576 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 FGFBP2Q9BYJ0 223 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 ABHD16BQ9H3Z7 469 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 TBC1D7Q9P0N9 293 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 COL4A3BPQ9Y5P4 624 aa16.84■□□□□ 0.29
VRK3-207ENST00000594092 MYH9P35579 1960 aaKnown RBP16.83■□□□□ 0.29
VRK3-207ENST00000594092 GOLGA6L6A8MZA4 724 aa16.83■□□□□ 0.28
VRK3-207ENST00000594092 ATP4AP20648 1035 aa16.83■□□□□ 0.28
VRK3-207ENST00000594092 CYP2B6P20813 491 aa16.83■□□□□ 0.28
VRK3-207ENST00000594092 PTGS1P23219 599 aa16.83■□□□□ 0.28
VRK3-207ENST00000594092 CDC25BP30305 580 aa16.83■□□□□ 0.28
VRK3-207ENST00000594092 TCF7P36402 384 aaPredicted RBP16.83■□□□□ 0.28
VRK3-207ENST00000594092 ADCYAP1R1P41586 468 aa16.83■□□□□ 0.28
VRK3-207ENST00000594092 ARHGAP1Q07960 439 aa16.83■□□□□ 0.28
VRK3-207ENST00000594092 ACVR2BQ13705 512 aa16.83■□□□□ 0.28
VRK3-207ENST00000594092 XKR9Q5GH70 373 aa16.83■□□□□ 0.28
VRK3-207ENST00000594092 OTUD6AQ7L8S5 288 aa16.83■□□□□ 0.28
VRK3-207ENST00000594092 SFR1Q86XK3 245 aa16.83■□□□□ 0.28
VRK3-207ENST00000594092 GUF1Q8N442 669 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms