RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-219ENST00000593101 DHX58Q96C10 678 aa17.37■□□□□ 0.37
PRKCSH-219ENST00000593101 C16orf70Q9BSU1 422 aa17.37■□□□□ 0.37
PRKCSH-219ENST00000593101 TMEM106CQ9BVX2 250 aa17.37■□□□□ 0.37
PRKCSH-219ENST00000593101 TUT1Q9H6E5 874 aaKnown RBP17.37■□□□□ 0.37
PRKCSH-219ENST00000593101 HPSEQ9Y251 543 aa17.37■□□□□ 0.37
PRKCSH-219ENST00000593101 LYPLA2O95372 231 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 SGPL1O95470 568 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 ASGR1P07306 291 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 GJB1P08034 283 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 XRCC6P12956 609 aaKnown RBP eCLIP17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 LIG1P18858 919 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 MARK3P27448 753 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 CHMP4BP1P59074 171 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 FAM160A1Q05DH4 1040 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 TMEM119Q4V9L6 283 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 XKR3Q5GH77 459 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 TRIM50Q86XT4 487 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 PIGOQ8TEQ8 1089 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 TSEN34Q9BSV6 310 aaKnown RBP17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 MTG1Q9BT17 334 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 WRAP73Q9P2S5 460 aaPredicted RBP17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 IGSF9BQ9UPX0 1349 aa17.36■□□□□ 0.37
PRKCSH-219ENST00000593101 A0A087X0B3 334 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 KBTBD13C9JR72 458 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 E9PMD0 336 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 ZNF862O60290 1169 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 ZNF202O95125 648 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 OATP04181 439 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 ATP4AP20648 1035 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 YWHABP31946 246 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 PSMC6P62333 389 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 PURAQ00577 322 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 PRKCEQ02156 737 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 NFKBIBQ15653 356 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 CXCL17Q6UXB2 119 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 CEP57L1Q8IYX8 460 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 FMR1NBQ8N0W7 255 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 VTI1AQ96AJ9 217 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 FAM167AQ96KS9 214 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 CCDC43Q96MW1 224 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 KATNAL1Q9BW62 490 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 RNPEPQ9H4A4 650 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 STK17AQ9UEE5 414 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 USP25Q9UHP3 1055 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 OGDHLQ9ULD0 1010 aa17.35■□□□□ 0.37
PRKCSH-219ENST00000593101 ZBTB39O15060 712 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 EYA4O95677 639 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 MYH9P35579 1960 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 PSEN2P49810 448 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 ACLYP53396 1101 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 PLCB4Q15147 1175 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 LONRF3Q496Y0 759 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 CCSAPQ6IQ19 270 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 KCNK18Q7Z418 384 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 ENGASEQ8NFI3 743 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 ATP8B4Q8TF62 1192 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 U2AF1L4Q8WU68 220 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 ANKEF1Q9NU02 776 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 SEPT9Q9UHD8 586 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 SERTAD1Q9UHV2 236 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 TRPC6Q9Y210 931 aa17.34■□□□□ 0.37
PRKCSH-219ENST00000593101 MOXD2PA6NHM9 499 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 HBP1O60381 514 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 NR1I2O75469 434 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 CABYRO75952 493 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 STBD1O95210 358 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 MBD3O95983 291 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 F2P00734 622 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 SSBP05455 408 aaKnown RBP eCLIP17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 PLA2G4BP0C869 781 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 SNW1Q13573 536 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 DHX8Q14562 1220 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 MFSD10Q14728 455 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 KIAA0753Q2KHM9 967 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 XKR9Q5GH70 373 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 SV2BQ7L1I2 683 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 CNNM3Q8NE01 707 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 RAD54LQ92698 747 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 KAT2BQ92831 832 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 NIFKQ9BYG3 293 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 CRISPLD2Q9H0B8 497 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 CUEDC2Q9H467 287 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 DACT1Q9NYF0 836 aa17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 DBR1Q9UK59 544 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-219ENST00000593101 WDR81Q562E7 1941 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 ARHGEF35A5YM69 484 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 DNM1LO00429 736 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 KINO60870 393 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 SLFN14P0C7P3 912 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 GJA8P48165 433 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 MCM6Q14566 821 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 E2F4Q16254 413 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 MTERF2Q49AM1 385 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 KANK3Q6NY19 840 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 ANO5Q75V66 913 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 GPT2Q8TD30 523 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 LARP4BQ92615 738 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 CCDC34Q96HJ3 373 aa17.32■□□□□ 0.36
PRKCSH-219ENST00000593101 CEP170P1Q96L14 293 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms