RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 OATP04181 439 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 CYP2C9P11712 490 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 CYP4A11Q02928 519 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 CEBPZQ03701 1054 aaKnown RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 CTTNQ14247 550 aaKnown RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 PDIA5Q14554 519 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 TMEM266Q2M3C6 531 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 FOXD4L6Q3SYB3 417 aaPredicted RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 ARL6IP4Q66PJ3 421 aaKnown RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 FOXD4L3Q6VB84 417 aaPredicted RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 SERINC5Q86VE9 423 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 CKAP2LQ8IYA6 745 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 IGSF22Q8N9C0 903 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 TRAPPC12Q8WVT3 735 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 BBXQ8WY36 941 aaPredicted RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 DHX38Q92620 1227 aaKnown RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 WNT8BQ93098 351 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 TRIM43Q96BQ3 446 aaPredicted RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 PRDM5Q9NQX1 630 aaPredicted RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 TMEM39AQ9NV64 488 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 TFIP11Q9UBB9 837 aaKnown RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 LRWD1Q9UFC0 647 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 ZMYND8Q9ULU4 1186 aaPredicted RBP11.16□□□□□ -0.62
TPM4-216ENST00000592822 CEP131Q9UPN4 1083 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 NR2E3Q9Y5X4 410 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 LTBP2Q14767 1821 aa11.16□□□□□ -0.62
TPM4-216ENST00000592822 MBLAC1A4D2B0 266 aaPredicted RBP11.15□□□□□ -0.62
TPM4-216ENST00000592822 TMEM150BA6NC51 233 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 VWA3AA6NCI4 1184 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 RRN3P2A6NIE6 340 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 PP2D1A8MPX8 630 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 H0YGN5 161 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 MED24O75448 989 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 SPATA31C1P0DKV0 1188 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 GNAT1P11488 350 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 SYN1P17600 705 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 ITGB8P26012 769 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 NASPP49321 788 aaPredicted RBP11.15□□□□□ -0.62
TPM4-216ENST00000592822 IGBP1P78318 339 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 GRIN1Q05586 938 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 PTK7Q13308 1070 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 TARBP2Q15633 366 aaKnown RBP11.15□□□□□ -0.62
TPM4-216ENST00000592822 TRIM71Q2Q1W2 868 aaKnown RBP11.15□□□□□ -0.62
TPM4-216ENST00000592822 XKR3Q5GH77 459 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 ZNF484Q5JVG2 852 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 ANO5Q75V66 913 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 CATSPER3Q86XQ3 398 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 TPH2Q8IWU9 490 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 C4orf19Q8IY42 314 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 NEK9Q8TD19 979 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 TNPO1Q92973 898 aaKnown RBP11.15□□□□□ -0.62
TPM4-216ENST00000592822 ZBTB10Q96DT7 871 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 FAM167AQ96KS9 214 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 ZNF396Q96N95 335 aaPredicted RBP11.15□□□□□ -0.62
TPM4-216ENST00000592822 LXNQ9BS40 222 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 NOC4LQ9BVI4 516 aaKnown RBP11.15□□□□□ -0.62
TPM4-216ENST00000592822 NIFKQ9BYG3 293 aaKnown RBP11.15□□□□□ -0.62
TPM4-216ENST00000592822 ZSWIM4Q9H7M6 989 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 NRBP2Q9NSY0 501 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 NOD1Q9Y239 953 aa11.15□□□□□ -0.62
TPM4-216ENST00000592822 COL1A2P08123 1366 aa11.15□□□□□ -0.63
TPM4-216ENST00000592822 EVPLQ92817 2033 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 ARID2Q68CP9 1835 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 UMODL1Q5DID0 1318 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 DDX11L8A8MPP1 907 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 ZBTB39O15060 712 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 DKC1O60832 514 aaKnown RBP eCLIP11.14□□□□□ -0.63
TPM4-216ENST00000592822 LYPLA2O95372 231 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 KLRC1P26715 233 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 RPA1P27694 616 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 MARCKSP29966 332 aaPredicted RBP11.14□□□□□ -0.63
TPM4-216ENST00000592822 CDC25AP30304 524 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 DNM1Q05193 864 aaKnown RBP11.14□□□□□ -0.63
TPM4-216ENST00000592822 SLC39A14Q15043 492 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 MTHFD1LQ6UB35 978 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 RUFY4Q6ZNE9 571 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 ZNF579Q8NAF0 562 aaKnown RBP11.14□□□□□ -0.63
TPM4-216ENST00000592822 LINC00301Q8NCQ3 95 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 CHAMP1Q96JM3 812 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 CEP89Q96ST8 783 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 MMTAG2Q9BU76 263 aaKnown RBP11.14□□□□□ -0.63
TPM4-216ENST00000592822 POLR3CQ9BUI4 534 aaPredicted RBP11.14□□□□□ -0.63
TPM4-216ENST00000592822 RAB34Q9BZG1 259 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 TUFT1Q9NNX1 390 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 SEPT9Q9UHD8 586 aaPredicted RBP11.14□□□□□ -0.63
TPM4-216ENST00000592822 TUBE1Q9UJT0 475 aa11.14□□□□□ -0.63
TPM4-216ENST00000592822 FBXO2Q9UK22 296 aaPredicted RBP11.14□□□□□ -0.63
TPM4-216ENST00000592822 MORC2Q9Y6X9 1032 aaPredicted RBP11.14□□□□□ -0.63
TPM4-216ENST00000592822 TCHHQ07283 1943 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 A0A087WWV3 80 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 C22orf31O95567 290 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 TIMP1P01033 207 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 RAG1P15918 1043 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 YWHABP31946 246 aaKnown RBP11.13□□□□□ -0.63
TPM4-216ENST00000592822 CYP2C18P33260 490 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 CCT6AP40227 531 aaKnown RBP11.13□□□□□ -0.63
TPM4-216ENST00000592822 NPEPPSP55786 919 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 NUCB2P80303 420 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 STK38Q15208 465 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms