RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CHRNA1P02708 482 aa30.79■■■□□ 2.52
SMAD4-213ENST00000591914 RPLP2P05387 115 aaKnown RBP30.79■■■□□ 2.52
SMAD4-213ENST00000591914 MKRN4PQ13434 485 aaPredicted RBP30.79■■■□□ 2.52
SMAD4-213ENST00000591914 NEK8Q86SG6 692 aa30.79■■■□□ 2.52
SMAD4-213ENST00000591914 ETNPPLQ8TBG4 499 aa30.79■■■□□ 2.52
SMAD4-213ENST00000591914 DNAJB3Q8WWF6 145 aa30.79■■■□□ 2.52
SMAD4-213ENST00000591914 GJA10Q969M2 543 aa30.79■■■□□ 2.52
SMAD4-213ENST00000591914 TEKT3Q9BXF9 490 aa30.79■■■□□ 2.52
SMAD4-213ENST00000591914 DDX25Q9UHL0 483 aaKnown RBP30.79■■■□□ 2.52
SMAD4-213ENST00000591914 PCDHA2Q9Y5H9 948 aa30.79■■■□□ 2.52
SMAD4-213ENST00000591914 IGSF9BQ9UPX0 1349 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 SIP14410 1827 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 MYH9P35579 1960 aaKnown RBP30.78■■■□□ 2.52
SMAD4-213ENST00000591914 MYOGP15173 224 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 KRT2P35908 639 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 MGAT3Q09327 533 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 GRIN2CQ14957 1233 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 LETM2Q2VYF4 491 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 PPP4R3AQ6IN85 833 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 PIK3AP1Q6ZUJ8 805 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 TNFRSF25Q93038 417 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 ZSCAN31Q96LW9 406 aaPredicted RBP30.78■■■□□ 2.52
SMAD4-213ENST00000591914 DISC1Q9NRI5 854 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 SAMM50Q9Y512 469 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 COL1A2P08123 1366 aa30.78■■■□□ 2.52
SMAD4-213ENST00000591914 WDR81Q562E7 1941 aa30.77■■■□□ 2.52
SMAD4-213ENST00000591914 SLC37A4O43826 429 aa30.77■■■□□ 2.52
SMAD4-213ENST00000591914 GCFC2P16383 781 aaKnown RBP30.77■■■□□ 2.52
SMAD4-213ENST00000591914 DEFB103AP81534 67 aa30.77■■■□□ 2.52
SMAD4-213ENST00000591914 EARS2Q5JPH6 523 aaKnown RBP30.77■■■□□ 2.52
SMAD4-213ENST00000591914 B3GNT9Q6UX72 402 aa30.77■■■□□ 2.52
SMAD4-213ENST00000591914 CCDC83Q8IWF9 413 aa30.77■■■□□ 2.52
SMAD4-213ENST00000591914 LLPHQ9BRT6 129 aaKnown RBP30.77■■■□□ 2.52
SMAD4-213ENST00000591914 UNC45AQ9H3U1 944 aa30.77■■■□□ 2.52
SMAD4-213ENST00000591914 SLC28A3Q9HAS3 691 aa30.77■■■□□ 2.52
SMAD4-213ENST00000591914 BRMS1Q9HCU9 246 aa30.77■■■□□ 2.52
SMAD4-213ENST00000591914 GABBR1Q9UBS5 961 aa30.77■■■□□ 2.52
SMAD4-213ENST00000591914 CHD7Q9P2D1 2997 aa30.76■■■□□ 2.52
SMAD4-213ENST00000591914 ZBTB42B2RXF5 422 aa30.76■■■□□ 2.51
SMAD4-213ENST00000591914 MMP1P03956 469 aa30.76■■■□□ 2.51
SMAD4-213ENST00000591914 SFNP31947 248 aa30.76■■■□□ 2.51
SMAD4-213ENST00000591914 JAK3P52333 1124 aa30.76■■■□□ 2.51
SMAD4-213ENST00000591914 NR5A1Q13285 461 aa30.76■■■□□ 2.51
SMAD4-213ENST00000591914 ZNF484Q5JVG2 852 aa30.76■■■□□ 2.51
SMAD4-213ENST00000591914 MTHFD1LQ6UB35 978 aa30.76■■■□□ 2.51
SMAD4-213ENST00000591914 BBXQ8WY36 941 aaPredicted RBP30.76■■■□□ 2.51
SMAD4-213ENST00000591914 MYLIPQ8WY64 445 aa30.76■■■□□ 2.51
SMAD4-213ENST00000591914 SEPT8Q92599 483 aa30.76■■■□□ 2.51
SMAD4-213ENST00000591914 SH2B1Q9NRF2 756 aaPredicted RBP30.76■■■□□ 2.51
SMAD4-213ENST00000591914 MICAL3Q7RTP6 2002 aa30.75■■■□□ 2.51
SMAD4-213ENST00000591914 RABEP1Q15276 862 aa30.75■■■□□ 2.51
SMAD4-213ENST00000591914 CKAP2LQ8IYA6 745 aa30.75■■■□□ 2.51
SMAD4-213ENST00000591914 RDM1Q8NG50 284 aa30.75■■■□□ 2.51
SMAD4-213ENST00000591914 FAM49AQ9H0Q0 323 aaPredicted RBP30.75■■■□□ 2.51
SMAD4-213ENST00000591914 SMIM35A0A1B0GVV1 85 aa30.74■■■□□ 2.51
SMAD4-213ENST00000591914 CHMP2AO43633 222 aa30.74■■■□□ 2.51
SMAD4-213ENST00000591914 KLRC1P26715 233 aa30.74■■■□□ 2.51
SMAD4-213ENST00000591914 MRPS6P82932 125 aaKnown RBP30.74■■■□□ 2.51
SMAD4-213ENST00000591914 TRIM29Q14134 588 aa30.74■■■□□ 2.51
SMAD4-213ENST00000591914 KRT40Q6A162 431 aa30.74■■■□□ 2.51
SMAD4-213ENST00000591914 NAP1L4Q99733 375 aaKnown RBP30.74■■■□□ 2.51
SMAD4-213ENST00000591914 UPF2Q9HAU5 1272 aaKnown RBP30.74■■■□□ 2.51
SMAD4-213ENST00000591914 KCNMB3Q9NPA1 279 aa30.74■■■□□ 2.51
SMAD4-213ENST00000591914 CDY2AQ9Y6F7 541 aa30.74■■■□□ 2.51
SMAD4-213ENST00000591914 FAM205CA6NFA0 338 aa30.73■■■□□ 2.51
SMAD4-213ENST00000591914 PPP2R2DQ66LE6 453 aa30.73■■■□□ 2.51
SMAD4-213ENST00000591914 APBB2Q92870 758 aa30.73■■■□□ 2.51
SMAD4-213ENST00000591914 FAM167AQ96KS9 214 aa30.73■■■□□ 2.51
SMAD4-213ENST00000591914 IFIH1Q9BYX4 1025 aaKnown RBP30.73■■■□□ 2.51
SMAD4-213ENST00000591914 EYSQ5T1H1 3165 aa30.73■■■□□ 2.51
SMAD4-213ENST00000591914 KIF28PB7ZC32 967 aa30.72■■■□□ 2.51
SMAD4-213ENST00000591914 ZNF862O60290 1169 aa30.72■■■□□ 2.51
SMAD4-213ENST00000591914 CCNT1O60563 726 aaKnown RBP30.72■■■□□ 2.51
SMAD4-213ENST00000591914 CA3P07451 260 aa30.72■■■□□ 2.51
SMAD4-213ENST00000591914 GHRP10912 638 aa30.72■■■□□ 2.51
SMAD4-213ENST00000591914 LPIN1Q14693 890 aa30.72■■■□□ 2.51
SMAD4-213ENST00000591914 IER5Q5VY09 327 aa30.72■■■□□ 2.51
SMAD4-213ENST00000591914 LIN28BQ6ZN17 250 aaKnown RBP eCLIP30.72■■■□□ 2.515e-7■■■□□ 18.5
SMAD4-213ENST00000591914 TMCO2Q7Z6W1 182 aaPredicted RBP30.72■■■□□ 2.51
SMAD4-213ENST00000591914 DIS3L2Q8IYB7 885 aaKnown RBP30.72■■■□□ 2.51
SMAD4-213ENST00000591914 FAM20AQ96MK3 541 aa30.72■■■□□ 2.51
SMAD4-213ENST00000591914 BTBD18B2RXH4 712 aa30.71■■■□□ 2.51
SMAD4-213ENST00000591914 GJB5O95377 273 aa30.71■■■□□ 2.51
SMAD4-213ENST00000591914 FOSBP53539 338 aa30.71■■■□□ 2.51
SMAD4-213ENST00000591914 UGCGQ16739 394 aa30.71■■■□□ 2.51
SMAD4-213ENST00000591914 FBXO47Q5MNV8 452 aa30.71■■■□□ 2.51
SMAD4-213ENST00000591914 MIER3Q7Z3K6 550 aa30.71■■■□□ 2.51
SMAD4-213ENST00000591914 NME8Q8N427 588 aa30.71■■■□□ 2.51
SMAD4-213ENST00000591914 TBX3O15119 743 aa30.7■■■□□ 2.51
SMAD4-213ENST00000591914 TLL1O43897 1013 aa30.7■■■□□ 2.51
SMAD4-213ENST00000591914 C22orf31O95567 290 aa30.7■■■□□ 2.51
SMAD4-213ENST00000591914 IL27Q8NEV9 243 aa30.7■■■□□ 2.51
SMAD4-213ENST00000591914 CEP131Q9UPN4 1083 aa30.7■■■□□ 2.51
SMAD4-213ENST00000591914 AMHP03971 560 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 OATP04181 439 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 FOSL2P15408 326 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 PRKCEQ02156 737 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 TSHZ1Q6ZSZ6 1077 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 KIAA0319LQ8IZA0 1049 aa30.69■■■□□ 2.5
SMAD4-213ENST00000591914 HAS1Q92839 578 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms