RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 HERC6Q8IVU3 1022 aa24.25■■□□□ 1.47
R3HDM4-206ENST00000590454 GIMAP8Q8ND71 665 aaPredicted RBP24.25■■□□□ 1.47
R3HDM4-206ENST00000590454 PPP1R13LQ8WUF5 828 aa24.25■■□□□ 1.47
R3HDM4-206ENST00000590454 SDF4Q9BRK5 362 aa24.25■■□□□ 1.47
R3HDM4-206ENST00000590454 FTOQ9C0B1 505 aaKnown RBP eCLIP24.25■■□□□ 1.471e-6■■□□□ 12.6
R3HDM4-206ENST00000590454 JPH1Q9HDC5 661 aaPredicted RBP24.25■■□□□ 1.47
R3HDM4-206ENST00000590454 SLC9A2Q9UBY0 812 aa24.25■■□□□ 1.47
R3HDM4-206ENST00000590454 BDP1A6H8Y1 2624 aa24.24■■□□□ 1.47
R3HDM4-206ENST00000590454 PITPNM1O00562 1244 aa24.24■■□□□ 1.47
R3HDM4-206ENST00000590454 IQCF3P0C7M6 154 aa24.24■■□□□ 1.47
R3HDM4-206ENST00000590454 HOXD8P13378 290 aaPredicted RBP24.24■■□□□ 1.47
R3HDM4-206ENST00000590454 NAP1L4Q99733 375 aaKnown RBP24.24■■□□□ 1.47
R3HDM4-206ENST00000590454 NOL7Q9UMY1 257 aaKnown RBP24.24■■□□□ 1.47
R3HDM4-206ENST00000590454 NOP56O00567 594 aaKnown RBP24.23■■□□□ 1.47
R3HDM4-206ENST00000590454 PSMD10O75832 226 aa24.23■■□□□ 1.47
R3HDM4-206ENST00000590454 ZNF286BP0CG31 522 aa24.23■■□□□ 1.47
R3HDM4-206ENST00000590454 TRAPPC10P48553 1259 aa24.23■■□□□ 1.47
R3HDM4-206ENST00000590454 NBPF20Q3BBV1 942 aa24.23■■□□□ 1.47
R3HDM4-206ENST00000590454 LRCH2Q5VUJ6 765 aa24.23■■□□□ 1.47
R3HDM4-206ENST00000590454 NFRKBQ6P4R8 1299 aa24.23■■□□□ 1.47
R3HDM4-206ENST00000590454 RBM19Q9Y4C8 960 aaKnown RBP24.23■■□□□ 1.47
R3HDM4-206ENST00000590454 NEMFO60524 1076 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 KPNA6O60684 536 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 ANP32AP39687 249 aaKnown RBP24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 ACTR2P61160 394 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 GRB10Q13322 594 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 BFSP2Q13515 415 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 DGKDQ16760 1214 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 BRAPQ7Z569 592 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 TRIM50Q86XT4 487 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 C4orf32Q8N8J7 132 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 KAT2BQ92831 832 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 MTMR9Q96QG7 549 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 RIT2Q99578 217 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 TBC1D22BQ9NU19 505 aa24.22■■□□□ 1.47
R3HDM4-206ENST00000590454 XIRP2A4UGR9 3374 aa24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 GAS7O60861 476 aa24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 GPR37L1O60883 481 aa24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 BAIAP3O94812 1187 aa24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 ARHGEF15O94989 841 aa24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 PTPN11Q06124 597 aaPredicted RBP24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 CALCRLQ16602 461 aa24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 UTP14CQ5TAP6 766 aaKnown RBP24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 PCYT2Q99447 389 aa24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 C16orf70Q9BSU1 422 aa24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 UNC45AQ9H3U1 944 aa24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 VAV3Q9UKW4 847 aa24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 ZDHHC9Q9Y397 364 aa24.21■■□□□ 1.47
R3HDM4-206ENST00000590454 PRRC2BQ5JSZ5 2229 aaKnown RBP24.2■■□□□ 1.47
R3HDM4-206ENST00000590454 CHMP2AO43633 222 aa24.2■■□□□ 1.46
R3HDM4-206ENST00000590454 PPFIA4O75335 1185 aa24.2■■□□□ 1.46
R3HDM4-206ENST00000590454 LGALS2P05162 132 aa24.2■■□□□ 1.46
R3HDM4-206ENST00000590454 ZSCAN22P10073 491 aaPredicted RBP24.2■■□□□ 1.46
R3HDM4-206ENST00000590454 TCF7P36402 384 aaPredicted RBP24.2■■□□□ 1.46
R3HDM4-206ENST00000590454 RILPL1Q5EBL4 403 aa24.2■■□□□ 1.46
R3HDM4-206ENST00000590454 B3GNT9Q6UX72 402 aa24.2■■□□□ 1.46
R3HDM4-206ENST00000590454 SEPT1Q8WYJ6 367 aa24.2■■□□□ 1.46
R3HDM4-206ENST00000590454 TEKT3Q9BXF9 490 aa24.2■■□□□ 1.46
R3HDM4-206ENST00000590454 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.2■■□□□ 1.46
R3HDM4-206ENST00000590454 NOD1Q9Y239 953 aa24.2■■□□□ 1.46
R3HDM4-206ENST00000590454 TBX3O15119 743 aa24.19■■□□□ 1.46
R3HDM4-206ENST00000590454 ATG7O95352 703 aa24.19■■□□□ 1.46
R3HDM4-206ENST00000590454 KCNJ6P48051 423 aa24.19■■□□□ 1.46
R3HDM4-206ENST00000590454 ABHD15Q6UXT9 468 aa24.19■■□□□ 1.46
R3HDM4-206ENST00000590454 FAM20AQ96MK3 541 aa24.19■■□□□ 1.46
R3HDM4-206ENST00000590454 LMCD1Q9NZU5 365 aa24.19■■□□□ 1.46
R3HDM4-206ENST00000590454 SCN10AQ9Y5Y9 1956 aa24.18■■□□□ 1.46
R3HDM4-206ENST00000590454 LPXNO60711 386 aa24.18■■□□□ 1.46
R3HDM4-206ENST00000590454 DDIT3P35638 169 aa24.18■■□□□ 1.46
R3HDM4-206ENST00000590454 TXKP42681 527 aa24.18■■□□□ 1.46
R3HDM4-206ENST00000590454 CHMP4BP1P59074 171 aa24.18■■□□□ 1.46
R3HDM4-206ENST00000590454 PTGDRQ13258 359 aa24.18■■□□□ 1.46
R3HDM4-206ENST00000590454 ZNF746Q6NUN9 644 aaPredicted RBP24.18■■□□□ 1.46
R3HDM4-206ENST00000590454 EML1O00423 815 aa24.17■■□□□ 1.46
R3HDM4-206ENST00000590454 MARCH6O60337 910 aa24.17■■□□□ 1.46
R3HDM4-206ENST00000590454 F13A1P00488 732 aa24.17■■□□□ 1.46
R3HDM4-206ENST00000590454 F2P00734 622 aa24.17■■□□□ 1.46
R3HDM4-206ENST00000590454 KRT76Q01546 638 aa24.17■■□□□ 1.46
R3HDM4-206ENST00000590454 SPIRE1Q08AE8 756 aa24.17■■□□□ 1.46
R3HDM4-206ENST00000590454 KHSRPQ92945 711 aaKnown RBP eCLIP24.17■■□□□ 1.46
R3HDM4-206ENST00000590454 C11orf16Q9NQ32 467 aa24.17■■□□□ 1.46
R3HDM4-206ENST00000590454 PI4K2BG5E9Z4 385 aa24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 LGR5O75473 907 aa24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 BAG4O95429 457 aaKnown RBP24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 BRD1O95696 1058 aa24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 OR52Z1P0C646 297 aa24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 PSEN2P49810 448 aa24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 ORC2Q13416 577 aaPredicted RBP24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 IL17AQ16552 155 aa24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 FOXD4L6Q3SYB3 417 aaPredicted RBP24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 FOXD4L3Q6VB84 417 aaPredicted RBP24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 CCDC60Q8IWA6 550 aaPredicted RBP24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 CCDC155Q8N6L0 562 aa24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 ZSCAN16Q9H4T2 348 aaPredicted RBP24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 CLIC4Q9Y696 253 aa24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 REV3LO60673 3130 aa24.16■■□□□ 1.46
R3HDM4-206ENST00000590454 SCN5AQ14524 2016 aa24.15■■□□□ 1.46
R3HDM4-206ENST00000590454 IGKV6D-21A0A0A0MT36 114 aa24.15■■□□□ 1.46
R3HDM4-206ENST00000590454 HAS3O00219 553 aa24.15■■□□□ 1.46
R3HDM4-206ENST00000590454 PPP2R5CQ13362 524 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms