RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 TEKT3Q9BXF9 490 aa20.61■□□□□ 0.89
DDX39A-212ENST00000590260 FTOQ9C0B1 505 aaKnown RBP eCLIP20.61■□□□□ 0.89
DDX39A-212ENST00000590260 DISC1Q9NRI5 854 aa20.61■□□□□ 0.89
DDX39A-212ENST00000590260 GABBR1Q9UBS5 961 aa20.61■□□□□ 0.89
DDX39A-212ENST00000590260 VAV3Q9UKW4 847 aa20.61■□□□□ 0.89
DDX39A-212ENST00000590260 CDH23Q9H251 3354 aa20.61■□□□□ 0.89
DDX39A-212ENST00000590260 RRN3P2A6NIE6 340 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 ZBBXA8MT70 800 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 CHMP2AO43633 222 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 CAND2O75155 1236 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 STBD1O95210 358 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 PSAPP07602 524 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 MYOGP15173 224 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 SLC26A2P50443 739 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 PLEKHG4Q58EX7 1191 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 FAM160B1Q5W0V3 765 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 CNKSR3Q6P9H4 555 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 DNAJB3Q8WWF6 145 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 TMX3Q96JJ7 454 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 SLC4A7Q9Y6M7 1214 aa20.6■□□□□ 0.89
DDX39A-212ENST00000590260 MYH9P35579 1960 aaKnown RBP20.59■□□□□ 0.89
DDX39A-212ENST00000590260 WDR64B1ANS9 1081 aa20.59■□□□□ 0.89
DDX39A-212ENST00000590260 EML1O00423 815 aa20.59■□□□□ 0.89
DDX39A-212ENST00000590260 CCNT1O60563 726 aaKnown RBP20.59■□□□□ 0.89
DDX39A-212ENST00000590260 PARNO95453 639 aaKnown RBP20.59■□□□□ 0.89
DDX39A-212ENST00000590260 WDR5P61964 334 aaKnown RBP20.59■□□□□ 0.89
DDX39A-212ENST00000590260 DEFB103AP81534 67 aa20.59■□□□□ 0.89
DDX39A-212ENST00000590260 MTHFD1LQ6UB35 978 aa20.59■□□□□ 0.89
DDX39A-212ENST00000590260 TMCO2Q7Z6W1 182 aaPredicted RBP20.59■□□□□ 0.89
DDX39A-212ENST00000590260 DBF4BQ8NFT6 615 aa20.59■□□□□ 0.89
DDX39A-212ENST00000590260 SEMA6BQ9H3T3 888 aa20.59■□□□□ 0.89
DDX39A-212ENST00000590260 MICAL3Q7RTP6 2002 aa20.58■□□□□ 0.89
DDX39A-212ENST00000590260 KIF28PB7ZC32 967 aa20.58■□□□□ 0.89
DDX39A-212ENST00000590260 HBP1O60381 514 aa20.58■□□□□ 0.89
DDX39A-212ENST00000590260 ARHGEF15O94989 841 aa20.58■□□□□ 0.89
DDX39A-212ENST00000590260 GCFC2P16383 781 aaKnown RBP20.58■□□□□ 0.89
DDX39A-212ENST00000590260 SPIRE1Q08AE8 756 aa20.58■□□□□ 0.89
DDX39A-212ENST00000590260 TAF2Q6P1X5 1199 aa20.58■□□□□ 0.89
DDX39A-212ENST00000590260 FBXO18Q8NFZ0 1043 aa20.58■□□□□ 0.89
DDX39A-212ENST00000590260 UPF2Q9HAU5 1272 aaKnown RBP20.58■□□□□ 0.89
DDX39A-212ENST00000590260 PCDHA2Q9Y5H9 948 aa20.58■□□□□ 0.89
DDX39A-212ENST00000590260 BAIAP3O94812 1187 aa20.57■□□□□ 0.88
DDX39A-212ENST00000590260 C22orf31O95567 290 aa20.57■□□□□ 0.88
DDX39A-212ENST00000590260 ACTN1P12814 892 aa20.57■□□□□ 0.88
DDX39A-212ENST00000590260 ATP2A2P16615 1042 aaKnown RBP20.57■□□□□ 0.88
DDX39A-212ENST00000590260 KLRC1P26715 233 aa20.57■□□□□ 0.88
DDX39A-212ENST00000590260 HMGN5P82970 282 aaKnown RBP20.57■□□□□ 0.88
DDX39A-212ENST00000590260 BBXQ8WY36 941 aaPredicted RBP20.57■□□□□ 0.88
DDX39A-212ENST00000590260 C8orf76Q96K31 380 aa20.57■□□□□ 0.88
DDX39A-212ENST00000590260 FAM49AQ9H0Q0 323 aaPredicted RBP20.57■□□□□ 0.88
DDX39A-212ENST00000590260 MTIF3Q9H2K0 278 aaKnown RBP20.57■□□□□ 0.88
DDX39A-212ENST00000590260 SAMM50Q9Y512 469 aa20.57■□□□□ 0.88
DDX39A-212ENST00000590260 CDY2AQ9Y6F7 541 aa20.57■□□□□ 0.88
DDX39A-212ENST00000590260 COL1A2P08123 1366 aa20.57■□□□□ 0.88
DDX39A-212ENST00000590260 LOXHD1Q8IVV2 1947 aa20.57■□□□□ 0.88
DDX39A-212ENST00000590260 SMIM35A0A1B0GVV1 85 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 TMEM150BA6NC51 233 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 ST18O60284 1047 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 SFNP31947 248 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 JAK3P52333 1124 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 PRKCEQ02156 737 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 TMEM62Q0P6H9 643 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 PPP2R5CQ13362 524 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 LPIN1Q14693 890 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 ZNF484Q5JVG2 852 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 ZNF697Q5TEC3 545 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.56■□□□□ 0.881e-6■■■■□ 20.8
DDX39A-212ENST00000590260 TRMT1LQ7Z2T5 733 aaKnown RBP20.56■□□□□ 0.88
DDX39A-212ENST00000590260 MIER3Q7Z3K6 550 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 LINC01465Q8N7H1 131 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 TIFAQ96CG3 184 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 FAM20AQ96MK3 541 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 CEP89Q96ST8 783 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 NKX2-4Q9H2Z4 354 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 BRMS1Q9HCU9 246 aa20.56■□□□□ 0.88
DDX39A-212ENST00000590260 WRAP73Q9P2S5 460 aaPredicted RBP20.56■□□□□ 0.88
DDX39A-212ENST00000590260 MRPS6P82932 125 aaKnown RBP20.55■□□□□ 0.88
DDX39A-212ENST00000590260 TRIM29Q14134 588 aa20.55■□□□□ 0.88
DDX39A-212ENST00000590260 HERC6Q8IVU3 1022 aa20.55■□□□□ 0.88
DDX39A-212ENST00000590260 KIAA0319LQ8IZA0 1049 aa20.55■□□□□ 0.88
DDX39A-212ENST00000590260 RDM1Q8NG50 284 aa20.55■□□□□ 0.88
DDX39A-212ENST00000590260 SLC9A7Q96T83 725 aa20.55■□□□□ 0.88
DDX39A-212ENST00000590260 CDHR5Q9HBB8 845 aa20.55■□□□□ 0.88
DDX39A-212ENST00000590260 CHD7Q9P2D1 2997 aa20.55■□□□□ 0.88
DDX39A-212ENST00000590260 COL6A3P12111 3177 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 TMEM265A0A087WTH1 108 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 ABHD14A-ACY1A0A1B0GW23 586 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.54■□□□□ 0.88
DDX39A-212ENST00000590260 TBX3O15119 743 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 OATP04181 439 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 GHRP10912 638 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 GRIN2CQ14957 1233 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 TARBP2Q15633 366 aaKnown RBP20.54■□□□□ 0.88
DDX39A-212ENST00000590260 FBXO47Q5MNV8 452 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 SPRED2Q7Z698 418 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 CKAP2LQ8IYA6 745 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 BANK1Q8NDB2 785 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 CDX2Q99626 313 aaPredicted RBP20.54■□□□□ 0.88
DDX39A-212ENST00000590260 TMEM60Q9H2L4 133 aa20.54■□□□□ 0.88
DDX39A-212ENST00000590260 AGO3Q9H9G7 860 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms