RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 SCG5P05408 212 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 CDR1P51861 262 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 CHRNEQ04844 493 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 SMAD4Q13485 552 aaKnown RBP4.23□□□□□ -1.73
ZNF540-207ENST00000589285 NR0B2Q15466 257 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 IGDCC3Q8IVU1 814 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 DHX37Q8IY37 1157 aaKnown RBP4.23□□□□□ -1.73
ZNF540-207ENST00000589285 ACSL6Q9UKU0 697 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 NWD2Q9ULI1 1742 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 ADGRB2O60241 1585 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 FAM83GA6ND36 823 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 NPIPB6E9PJ23 425 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 SOD2P04179 222 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 C8AP07357 584 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 SULT6B1Q6IMI4 303 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 CYP2R1Q6VVX0 501 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 CLEC4DQ8WXI8 215 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 MRFAP1L1Q96HT8 127 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 DHRS4Q9BTZ2 278 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 MIS18AQ9NYP9 233 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 H2AFY2Q9P0M6 372 aaPredicted RBP4.23□□□□□ -1.73
ZNF540-207ENST00000589285 QRICH2Q9H0J4 1663 aa4.23□□□□□ -1.73
ZNF540-207ENST00000589285 RGPD8O14715 1765 aaPredicted RBP4.22□□□□□ -1.73
ZNF540-207ENST00000589285 BIN1O00499 593 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 GCP02774 474 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 PI3P19957 117 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 DLG4P78352 724 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 C2orf27AQ580R0 203 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 GALNT18Q6P9A2 607 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 SPPL2CQ8IUH8 684 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 PCDH19Q8TAB3 1148 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 NCOA5Q9HCD5 579 aaKnown RBP4.22□□□□□ -1.73
ZNF540-207ENST00000589285 EPB41L4AQ9HCS5 686 aaPredicted RBP4.22□□□□□ -1.73
ZNF540-207ENST00000589285 PRR13Q9NZ81 148 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 POLKQ9UBT6 870 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 MBD1Q9UIS9 605 aaPredicted RBP4.22□□□□□ -1.73
ZNF540-207ENST00000589285 TIMM13Q9Y5L4 95 aaPredicted RBP4.22□□□□□ -1.73
ZNF540-207ENST00000589285 COL24A1Q17RW2 1714 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 USP54Q70EL1 1684 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 MAP3K19Q56UN5 1328 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 MYBBP1AQ9BQG0 1328 aaKnown RBP4.22□□□□□ -1.73
ZNF540-207ENST00000589285 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.22□□□□□ -1.73
ZNF540-207ENST00000589285 KRT37O76014 449 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 CENPBP07199 599 aaPredicted RBP4.22□□□□□ -1.73
ZNF540-207ENST00000589285 FGFR1P11362 822 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 JAM2P57087 298 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 EVA1CP58658 441 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 SYT8Q8NBV8 401 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 SH3RF2Q8TEC5 729 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 NRXN1Q9ULB1 1477 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.22□□□□□ -1.73
ZNF540-207ENST00000589285 ADAMTS20P59510 1910 aa4.22□□□□□ -1.73
ZNF540-207ENST00000589285 KPNA6O60684 536 aa4.21□□□□□ -1.73
ZNF540-207ENST00000589285 MPOP05164 745 aa4.21□□□□□ -1.73
ZNF540-207ENST00000589285 PRKAR2BP31323 418 aa4.21□□□□□ -1.73
ZNF540-207ENST00000589285 ZNF143P52747 638 aaPredicted RBP4.21□□□□□ -1.73
ZNF540-207ENST00000589285 LDHDQ86WU2 507 aa4.21□□□□□ -1.73
ZNF540-207ENST00000589285 PTRH1Q86Y79 214 aaKnown RBP4.21□□□□□ -1.73
ZNF540-207ENST00000589285 CRACR2BQ8N4Y2 399 aaPredicted RBP4.21□□□□□ -1.73
ZNF540-207ENST00000589285 SIRT5Q9NXA8 310 aa4.21□□□□□ -1.73
ZNF540-207ENST00000589285 RGS17Q9UGC6 210 aaPredicted RBP4.21□□□□□ -1.73
ZNF540-207ENST00000589285 CDC42BPGQ6DT37 1551 aa4.21□□□□□ -1.73
ZNF540-207ENST00000589285 ANKRD36BQ8N2N9 1353 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 NPHS1O60500 1241 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 RPL11P62913 178 aaKnown RBP4.21□□□□□ -1.74
ZNF540-207ENST00000589285 NBPF6Q5VWK0 638 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 LBX2Q6XYB7 198 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 TOM1L2Q6ZVM7 507 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 ZC3H7AQ8IWR0 971 aaKnown RBP4.21□□□□□ -1.74
ZNF540-207ENST00000589285 IGSF22Q8N9C0 903 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 ZNF526Q8TF50 670 aaPredicted RBP4.21□□□□□ -1.74
ZNF540-207ENST00000589285 PHACTR3Q96KR7 559 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 NBPF4Q96M43 638 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 CFAP53Q96M91 514 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 TNPO3Q9Y5L0 923 aaKnown RBP4.21□□□□□ -1.74
ZNF540-207ENST00000589285 NPFFR2Q9Y5X5 522 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 ARHGEF28Q8N1W1 1705 aaKnown RBP4.21□□□□□ -1.74
ZNF540-207ENST00000589285 BUB1BO60566 1050 aaPredicted RBP4.21□□□□□ -1.74
ZNF540-207ENST00000589285 PLA2G1BP04054 148 aaKnown RBP4.21□□□□□ -1.74
ZNF540-207ENST00000589285 JMJD7P0C870 316 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 GRK2P25098 689 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 GRK3P35626 688 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 ARL4AP40617 200 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 MAP4K2Q12851 820 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 STYK1Q6J9G0 422 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 ZC3H14Q6PJT7 736 aaKnown RBP4.21□□□□□ -1.74
ZNF540-207ENST00000589285 NXPE1Q8N323 547 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 PNISRQ8TF01 805 aaKnown RBP4.21□□□□□ -1.74
ZNF540-207ENST00000589285 TRIM39Q9HCM9 518 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 CATSPERZQ9NTU4 200 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 SFMBT1Q9UHJ3 866 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 PTCH1Q13635 1447 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 ADGRL3Q9HAR2 1447 aa4.21□□□□□ -1.74
ZNF540-207ENST00000589285 NPHP3Q7Z494 1330 aa4.2□□□□□ -1.74
ZNF540-207ENST00000589285 ATP7BP35670 1465 aa4.2□□□□□ -1.74
ZNF540-207ENST00000589285 CRYBG1Q9Y4K1 1723 aa4.2□□□□□ -1.74
ZNF540-207ENST00000589285 SBNO2Q9Y2G9 1366 aa4.2□□□□□ -1.74
ZNF540-207ENST00000589285 JUNBP17275 347 aaPredicted RBP4.2□□□□□ -1.74
ZNF540-207ENST00000589285 RALBP1Q15311 655 aa4.2□□□□□ -1.74
ZNF540-207ENST00000589285 STEAP3Q658P3 488 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms