RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 USP11P51784 963 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 KRT76Q01546 638 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 NR5A1Q13285 461 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 NONOQ15233 471 aaKnown RBP eCLIP17.21■□□□□ 0.35
ERCC1-209ENST00000589214 INF2Q27J81 1249 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 EARS2Q5JPH6 523 aaKnown RBP17.21■□□□□ 0.35
ERCC1-209ENST00000589214 FAM26DQ5JW98 314 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 SWSAP1Q6NVH7 229 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 FAM117BQ6P1L5 589 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 PDXDC2PQ6P474 469 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.21■□□□□ 0.35
ERCC1-209ENST00000589214 KRT25Q7Z3Z0 450 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 RSPH3Q86UC2 560 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 SEPT8Q92599 483 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 TNPO1Q92973 898 aaKnown RBP17.21■□□□□ 0.35
ERCC1-209ENST00000589214 ZBED2Q9BTP6 218 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 SAMM50Q9Y512 469 aa17.21■□□□□ 0.35
ERCC1-209ENST00000589214 COL4A4P53420 1690 aaPredicted RBP17.2■□□□□ 0.34
ERCC1-209ENST00000589214 WDR81Q562E7 1941 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 CCDC194A0A1B0GVG4 234 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 FAM205CA6NFA0 338 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 CHMP2AO43633 222 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 CHRNA1P02708 482 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 MGAT3Q09327 533 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 KRT40Q6A162 431 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 PIK3AP1Q6ZUJ8 805 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 RPAINQ86UA6 219 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 CKAP2LQ8IYA6 745 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 SMAP1Q8IYB5 467 aaPredicted RBP17.2■□□□□ 0.34
ERCC1-209ENST00000589214 MYOCDQ8IZQ8 938 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 ATP8B4Q8TF62 1192 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 GJA10Q969M2 543 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 LLPHQ9BRT6 129 aaKnown RBP17.2■□□□□ 0.34
ERCC1-209ENST00000589214 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
ERCC1-209ENST00000589214 CERS4Q9HA82 394 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 CDY2AQ9Y6F7 541 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 CDH23Q9H251 3354 aa17.2■□□□□ 0.34
ERCC1-209ENST00000589214 MYH9P35579 1960 aaKnown RBP17.19■□□□□ 0.34
ERCC1-209ENST00000589214 LCHNA4D1U4 455 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 HBP1O60381 514 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 GAS7O60861 476 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 AMHP03971 560 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 PSAPP07602 524 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 KRT2P35908 639 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 MRPS6P82932 125 aaKnown RBP17.19■□□□□ 0.34
ERCC1-209ENST00000589214 TMEM62Q0P6H9 643 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 MKRN4PQ13434 485 aaPredicted RBP17.19■□□□□ 0.34
ERCC1-209ENST00000589214 TRIM29Q14134 588 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 LRCH2Q5VUJ6 765 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 TRMT1LQ7Z2T5 733 aaKnown RBP17.19■□□□□ 0.34
ERCC1-209ENST00000589214 SLC5A5Q92911 643 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 TMX3Q96JJ7 454 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 TEKT3Q9BXF9 490 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 GABBR1Q9UBS5 961 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 PCDHA10Q9Y5I2 948 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 IGSF9BQ9UPX0 1349 aa17.19■□□□□ 0.34
ERCC1-209ENST00000589214 COL6A3P12111 3177 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 COL1A2P08123 1366 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 WDR64B1ANS9 1081 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 BTBD18B2RXH4 712 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 GJB5O95377 273 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 MMP1P03956 469 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 TAP1Q03518 808 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 ADGRE1Q14246 886 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 LPIN1Q14693 890 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 LETM2Q2VYF4 491 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 Q4G0T1 1027 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 MTHFD1LQ6UB35 978 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 SPRED2Q7Z698 418 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 APBB2Q92870 758 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 RIT2Q99578 217 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 UNC45AQ9H3U1 944 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 PCDHA2Q9Y5H9 948 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 TRPV2Q9Y5S1 764 aa17.18■□□□□ 0.34
ERCC1-209ENST00000589214 M0QZ92 97 aa17.17■□□□□ 0.34
ERCC1-209ENST00000589214 RPLP2P05387 115 aaKnown RBP17.17■□□□□ 0.34
ERCC1-209ENST00000589214 ATP4AP20648 1035 aa17.17■□□□□ 0.34
ERCC1-209ENST00000589214 IGFBP4P22692 258 aa17.17■□□□□ 0.34
ERCC1-209ENST00000589214 FBXO47Q5MNV8 452 aa17.17■□□□□ 0.34
ERCC1-209ENST00000589214 MOXD1Q6UVY6 613 aa17.17■□□□□ 0.34
ERCC1-209ENST00000589214 DIS3L2Q8IYB7 885 aaKnown RBP17.17■□□□□ 0.34
ERCC1-209ENST00000589214 USP38Q8NB14 1042 aa17.17■□□□□ 0.34
ERCC1-209ENST00000589214 FAM184AQ8NB25 1140 aa17.17■□□□□ 0.34
ERCC1-209ENST00000589214 TNFRSF25Q93038 417 aa17.17■□□□□ 0.34
ERCC1-209ENST00000589214 C8orf76Q96K31 380 aa17.17■□□□□ 0.34
ERCC1-209ENST00000589214 BRMS1Q9HCU9 246 aa17.17■□□□□ 0.34
ERCC1-209ENST00000589214 DISC1Q9NRI5 854 aa17.17■□□□□ 0.34
ERCC1-209ENST00000589214 DDX25Q9UHL0 483 aaKnown RBP17.17■□□□□ 0.34
ERCC1-209ENST00000589214 MAFBQ9Y5Q3 323 aaPredicted RBP17.17■□□□□ 0.34
ERCC1-209ENST00000589214 CYP3A7-CYP3A51PA0A087WV96 503 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 SMIM35A0A1B0GVV1 85 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 SLC37A4O43826 429 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 CYP3A7P24462 503 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 KLRC1P26715 233 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 JAK3P52333 1124 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 UGCGQ16739 394 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 ZNF484Q5JVG2 852 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 IER5Q5VY09 327 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 TSHZ1Q6ZSZ6 1077 aa17.16■□□□□ 0.34
ERCC1-209ENST00000589214 NEK8Q86SG6 692 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms