RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 ATP2B1P20020 1258 aa21.18■□□□□ 0.98
ERCC1-207ENST00000588738 ATP4AP20648 1035 aa21.18■□□□□ 0.98
ERCC1-207ENST00000588738 U2AF2P26368 475 aaKnown RBP eCLIP21.18■□□□□ 0.98
ERCC1-207ENST00000588738 PPP2R5CQ13362 524 aa21.18■□□□□ 0.98
ERCC1-207ENST00000588738 CALCRLQ16602 461 aa21.18■□□□□ 0.98
ERCC1-207ENST00000588738 ZNF484Q5JVG2 852 aa21.18■□□□□ 0.98
ERCC1-207ENST00000588738 HERVK_113Q902F9 699 aa21.18■□□□□ 0.98
ERCC1-207ENST00000588738 FAM167AQ96KS9 214 aa21.18■□□□□ 0.98
ERCC1-207ENST00000588738 IGSF9BQ9UPX0 1349 aa21.18■□□□□ 0.98
ERCC1-207ENST00000588738 COL1A2P08123 1366 aa21.18■□□□□ 0.98
ERCC1-207ENST00000588738 H3BQV1 296 aa21.17■□□□□ 0.98
ERCC1-207ENST00000588738 NEMFO60524 1076 aa21.17■□□□□ 0.98
ERCC1-207ENST00000588738 RPLP2P05387 115 aaKnown RBP21.17■□□□□ 0.98
ERCC1-207ENST00000588738 ACTN1P12814 892 aa21.17■□□□□ 0.98
ERCC1-207ENST00000588738 TRAF7Q6Q0C0 670 aa21.17■□□□□ 0.98
ERCC1-207ENST00000588738 RUFY4Q6ZNE9 571 aa21.17■□□□□ 0.98
ERCC1-207ENST00000588738 OTOP2Q7RTS6 562 aa21.17■□□□□ 0.98
ERCC1-207ENST00000588738 TRMT1LQ7Z2T5 733 aaKnown RBP21.17■□□□□ 0.98
ERCC1-207ENST00000588738 RPAINQ86UA6 219 aa21.17■□□□□ 0.98
ERCC1-207ENST00000588738 TRAPPC12Q8WVT3 735 aa21.17■□□□□ 0.98
ERCC1-207ENST00000588738 VWCEQ96DN2 955 aa21.17■□□□□ 0.98
ERCC1-207ENST00000588738 NRBP2Q9NSY0 501 aa21.17■□□□□ 0.98
ERCC1-207ENST00000588738 VAV3Q9UKW4 847 aa21.17■□□□□ 0.98
ERCC1-207ENST00000588738 NOL7Q9UMY1 257 aaKnown RBP21.17■□□□□ 0.98
ERCC1-207ENST00000588738 KIF28PB7ZC32 967 aa21.16■□□□□ 0.98
ERCC1-207ENST00000588738 SOX1O00570 391 aaPredicted RBP21.16■□□□□ 0.98
ERCC1-207ENST00000588738 WNT7AO00755 349 aa21.16■□□□□ 0.98
ERCC1-207ENST00000588738 MCM7P33993 719 aa21.16■□□□□ 0.98
ERCC1-207ENST00000588738 TRAPPC10P48553 1259 aa21.16■□□□□ 0.98
ERCC1-207ENST00000588738 MCTP1Q6DN14 999 aa21.16■□□□□ 0.98
ERCC1-207ENST00000588738 PCDHA12Q9UN75 941 aa21.16■□□□□ 0.98
ERCC1-207ENST00000588738 CEP131Q9UPN4 1083 aa21.16■□□□□ 0.98
ERCC1-207ENST00000588738 PCDHA2Q9Y5H9 948 aa21.16■□□□□ 0.98
ERCC1-207ENST00000588738 ZNF862O60290 1169 aa21.15■□□□□ 0.98
ERCC1-207ENST00000588738 NBNO60934 754 aa21.15■□□□□ 0.98
ERCC1-207ENST00000588738 OATP04181 439 aa21.15■□□□□ 0.98
ERCC1-207ENST00000588738 KLRC1P26715 233 aa21.15■□□□□ 0.98
ERCC1-207ENST00000588738 ORC2Q13416 577 aaPredicted RBP21.15■□□□□ 0.98
ERCC1-207ENST00000588738 GPNMBQ14956 572 aa21.15■□□□□ 0.98
ERCC1-207ENST00000588738 RASIP1Q5U651 963 aa21.15■□□□□ 0.98
ERCC1-207ENST00000588738 LARP1BQ659C4 914 aaKnown RBP21.15■□□□□ 0.98
ERCC1-207ENST00000588738 MTHFD1LQ6UB35 978 aa21.15■□□□□ 0.98
ERCC1-207ENST00000588738 TET1Q8NFU7 2136 aa21.15■□□□□ 0.98
ERCC1-207ENST00000588738 DNAJB3Q8WWF6 145 aa21.15■□□□□ 0.98
ERCC1-207ENST00000588738 LRCH3Q96II8 777 aa21.15■□□□□ 0.98
ERCC1-207ENST00000588738 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.14■□□□□ 0.97
ERCC1-207ENST00000588738 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.14■□□□□ 0.97
ERCC1-207ENST00000588738 K7ELQ4 463 aaPredicted RBP21.14■□□□□ 0.97
ERCC1-207ENST00000588738 EML1O00423 815 aa21.14■□□□□ 0.97
ERCC1-207ENST00000588738 CXCL10P02778 98 aa21.14■□□□□ 0.97
ERCC1-207ENST00000588738 CTSHP09668 335 aa21.14■□□□□ 0.97
ERCC1-207ENST00000588738 TXKP42681 527 aa21.14■□□□□ 0.97
ERCC1-207ENST00000588738 PRKCEQ02156 737 aa21.14■□□□□ 0.97
ERCC1-207ENST00000588738 UGCGQ16739 394 aa21.14■□□□□ 0.97
ERCC1-207ENST00000588738 FAM26DQ5JW98 314 aa21.14■□□□□ 0.97
ERCC1-207ENST00000588738 ZBTB10Q96DT7 871 aa21.14■□□□□ 0.97
ERCC1-207ENST00000588738 TTC12Q9H892 705 aaPredicted RBP21.14■□□□□ 0.97
ERCC1-207ENST00000588738 EVPLQ92817 2033 aa21.14■□□□□ 0.97
ERCC1-207ENST00000588738 SMIM35A0A1B0GVV1 85 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 ZBBXA8MT70 800 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 ZBTB42B2RXF5 422 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 DKC1O60832 514 aaKnown RBP eCLIP21.13■□□□□ 0.97
ERCC1-207ENST00000588738 P4HBP07237 508 aaKnown RBP21.13■□□□□ 0.97
ERCC1-207ENST00000588738 PSMC5P62195 406 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 SMAD3P84022 425 aaKnown RBP21.13■□□□□ 0.97
ERCC1-207ENST00000588738 MBTPS1Q14703 1052 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 EPHA7Q15375 998 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 ZNF174Q15697 407 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 XKR3Q5GH77 459 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 TTC38Q5R3I4 469 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 IER5Q5VY09 327 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 NCAPH2Q6IBW4 605 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 CNKSR3Q6P9H4 555 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 BANK1Q8NDB2 785 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 SNX21Q969T3 373 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 INTS4Q96HW7 963 aaKnown RBP21.13■□□□□ 0.97
ERCC1-207ENST00000588738 MTMR9Q96QG7 549 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 FAM49AQ9H0Q0 323 aaPredicted RBP21.13■□□□□ 0.97
ERCC1-207ENST00000588738 CXXC1Q9P0U4 656 aaPredicted RBP21.13■□□□□ 0.97
ERCC1-207ENST00000588738 SLC4A7Q9Y6M7 1214 aa21.13■□□□□ 0.97
ERCC1-207ENST00000588738 QARSP47897 775 aaKnown RBP21.12■□□□□ 0.97
ERCC1-207ENST00000588738 SPIRE1Q08AE8 756 aa21.12■□□□□ 0.97
ERCC1-207ENST00000588738 GPR153Q6NV75 609 aa21.12■□□□□ 0.97
ERCC1-207ENST00000588738 NME8Q8N427 588 aa21.12■□□□□ 0.97
ERCC1-207ENST00000588738 TMEM60Q9H2L4 133 aa21.12■□□□□ 0.97
ERCC1-207ENST00000588738 M0QZ92 97 aa21.11■□□□□ 0.97
ERCC1-207ENST00000588738 MAGEB2O15479 319 aa21.11■□□□□ 0.97
ERCC1-207ENST00000588738 BAIAP3O94812 1187 aa21.11■□□□□ 0.97
ERCC1-207ENST00000588738 CHRNA1P02708 482 aa21.11■□□□□ 0.97
ERCC1-207ENST00000588738 PDCP20941 246 aa21.11■□□□□ 0.97
ERCC1-207ENST00000588738 MRPS6P82932 125 aaKnown RBP21.11■□□□□ 0.97
ERCC1-207ENST00000588738 NIFKQ9BYG3 293 aaKnown RBP21.11■□□□□ 0.97
ERCC1-207ENST00000588738 DDX11L8A8MPP1 907 aa21.1■□□□□ 0.97
ERCC1-207ENST00000588738 C22orf31O95567 290 aa21.1■□□□□ 0.97
ERCC1-207ENST00000588738 IKBKEQ14164 716 aa21.1■□□□□ 0.97
ERCC1-207ENST00000588738 SEPT9Q9UHD8 586 aaPredicted RBP21.1■□□□□ 0.97
ERCC1-207ENST00000588738 CDY2AQ9Y6F7 541 aa21.1■□□□□ 0.97
ERCC1-207ENST00000588738 SIP14410 1827 aa21.09■□□□□ 0.97
ERCC1-207ENST00000588738 ABHD14A-ACY1A0A1B0GW23 586 aa21.09■□□□□ 0.97
ERCC1-207ENST00000588738 EFCAB14O75071 495 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms